Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3170 ATGAAGCAGTTAATTCGCCGTTTATCTCGTGTCTCCGACTCATCTCAGTACACACTACTTCGAAACGATTCAATTCATTGCCGGCTAACTGGCAGTAGCCGTAGCCGGCGAGTTGAATCGTTTCGTCTTGTCTTGTCGAAGATCCGGAGATCTTCTTCCGCAGTTGTACCGGAAGGACATGTTCCGATCTACGTCGGAGATGAGATGGAACGGTTTGTTGTTTCTGCCGAGATTCTTAATCATCCGATTTTTATTAAGCTTTTGAATGAATCAGCGCAGGAATACGGTTATGAACAGAAAGGTGTTCTTCGGTTACCGTGTAATGTTTTCGTTTTTGAGCGCGTGGTTGAAGCGTTGCAGCTTGGACTCGACACGCGCCACATCAATGAACTTCTTAATTCGTCGGAAGAAGAATTCTGTTAA 423 0.4515 MKQLIRRLSRVSDSSQYTLLRNDSIHCRLTGSSRSRRVESFRLVLSKIRRSSSAVVPEGHVPIYVGDEMERFVVSAEILNHPIFIKLLNESAQEYGYEQKGVLRLPCNVFVFERVVEALQLGLDTRHINELLNSSEEEFC* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3170 140 Pfam Auxin responsive protein 14 119 IPR003676 GO:0009733
Tpr7g3170 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 138 IPR003676 GO:0009733
Tpr7g3170 140 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3170 Tpr-Chr7 39356756 39357696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3170 56 116 Calmodulin-binding Proteins AT4G34750 47.541 2.53e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3170 K14488 - gmx:100806044 197.593