Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3168 ATGGGAAAAGGAAGAGCACCATGCTGTGATAAGAGTCAAGTTAAGAGAGGACCTTGGAGCCCTGCTGAAGATCTTAAGCTTATTGCTTTTGTTCAGAAATTTGGTCATGAAAATTGGAGATCTCTCCCTAAACAAGCAGGTCTTCAACGTTGTGGGAAAAGCTGTCGTTTGAGATGGATCAATTATCTTAGGCCTGATTTAAAGAGAGGCAATTTTACAGTGGAGGAAGAGGATACCATTATAAGGCTACATAAGGCCTTTGGAAACAAATGGTCAAAGATTGCATCATGTTTGCCTGGTAGAACTGATAATGAGATCAAGAATGTGTGGAACACACATTTAAAGAAAAAGCTTGTTGTCAAAAATTCAGAGTCAACAAGTGGAGATGATGAATCCAAGTTAGAATCATCAATAACTTCACCTTCTTCATCAGAATCATTTATATCAAATGAGGTACAAATAAAAGATTCTGAAAAACAAGTATCCAACAATGATGAACTTGATAATATTATCAATGAAGATCCAAAAGGGTCATCATCAAATTCATTATCATCTTCATTTGAGTCAAATATTTTGAACTCAAGTCAAATTGTTAATAAAAAATTGCTTGAGCAAGAATTGGCTCCTTTAGGAACTTTTGATATTGACAATATATTAGAAGAGATGGAAAACACAAATGACTTAATTGAAATACCATGGGAATCAGATTATGATCTTTGGAATTTTATTGACAATATTGGATGTTATCAAGCAAGTGTTGGTGAAGAAAATGTTCAAAATAATGAGAATGAGTTTGGAGCATTAGGTGAAAAAAAGGAGTCAAACAATGAGGTCCTACCAAAGAATTGTGGAGTTGAGCAAGAAATTAACCTTCATGAGGCATTTGATTTCAATGATATTATAATGTCTGATTCTGAATTAGACTTTGGTGATATTCAATTGTGGCCTTCTATGCCACATAATAGTAGTCCTAAAGTTTAA 981 0.3384 MGKGRAPCCDKSQVKRGPWSPAEDLKLIAFVQKFGHENWRSLPKQAGLQRCGKSCRLRWINYLRPDLKRGNFTVEEEDTIIRLHKAFGNKWSKIASCLPGRTDNEIKNVWNTHLKKKLVVKNSESTSGDDESKLESSITSPSSSESFISNEVQIKDSEKQVSNNDELDNIINEDPKGSSSNSLSSSFESNILNSSQIVNKKLLEQELAPLGTFDIDNILEEMENTNDLIEIPWESDYDLWNFIDNIGCYQASVGEENVQNNENEFGALGEKKESNNEVLPKNCGVEQEINLHEAFDFNDIIMSDSELDFGDIQLWPSMPHNSSPKV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3168 326 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Tpr7g3168 326 PANTHER TRANSCRIPTION FACTOR MYB72 1 258 - -
Tpr7g3168 326 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Tpr7g3168 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Tpr7g3168 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Tpr7g3168 326 SMART sant 68 116 IPR001005 -
Tpr7g3168 326 SMART sant 15 65 IPR001005 -
Tpr7g3168 326 CDD SANT 71 114 IPR001005 -
Tpr7g3168 326 Gene3D - 16 68 - -
Tpr7g3168 326 MobiDBLite consensus disorder prediction 132 147 - -
Tpr7g3168 326 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 258 - -
Tpr7g3168 326 CDD SANT 18 63 IPR001005 -
Tpr7g3168 326 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Tpr7g3168 326 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Tpr7g3168 326 Gene3D - 71 140 - -
Tpr7g3168 326 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Tpr7g3168 326 MobiDBLite consensus disorder prediction 121 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3168 Tpr-Chr7 39274310 39278404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3168 1 257 MYB Transcription Factor Family AT1G79180 47.931 7.89e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g3168 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3168 K09422 - gmx:100101836 365.925