Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3160 ATGGGAGCACTTAGCAAATACTATAACTATAATTCTAACCCTTATCAACCTCTTCAAACTAACACCAACTCAGAAATCAACACTTTTCAACATCATGAACAAGAACAACAACTGTTATTACCTGAATTAACACAAATTTTAGAACATAACCACCATTTTTCTTCATCTTATTTAGATGAAACTTTGTTTTTTCAAAGTCCTTATTTTTACTCAAATGAGACTTACCCTTCTCATGAACAACTACTTTTTGATTCAACTTTCTCTTCTCAAAATGATGGATTCATTTCAATGAATGAAATTTTCCCAAATGAAGAAAATTTCAACACTTACCTTCCATGTGCAAAACGACAAAAGCTATGTTATGAGGAGAAAAAAGTTCAACAACAAGAAGAGATTTTGAACTCAACCAATTTTTTTGTGGATGAGTTTATGACTAACCCTTTTGGTTCTTTTGAAGCAGAACAACCATTTTGTTCTGCTTCGAAAATTGTTGGTTGTGAGAAGAAAGTGTACGAAAAGACTATCTCGTCACAGAGTATCGTGGCGAGAGAAAGAAGAAGAAAGATAACTGAGAAGACACAAGAGCTTGGAAAGTTGGTTCCTGGTGGGCCTAAGATGAATACAGCAGAGATGCTTATTGGTGCTGCTAATTATGTTAAGTTTCTTCAAGCTCAAGTTGGAATGCTTCAAGTTATGGGAACATTAAGCAAGGAAGAAAAGGAACCTCCTCCAAGTCAAGATATACACAAACTACTTGTTTCTCCCTTTGTTCAAGAGAAATTGTATTTGGAAGAAAAGTGCTTTGTTACAAAAGAGTTTATCACCACACTAACCAATCATGATAATGTTAGATCAAAACCTACCATCCTTAAGGGTCTTAAACAGCTTATTGGAACAGAGATTAATGAGAAGAAACCAAAGCAAGAATAA 930 0.3419 MGALSKYYNYNSNPYQPLQTNTNSEINTFQHHEQEQQLLLPELTQILEHNHHFSSSYLDETLFFQSPYFYSNETYPSHEQLLFDSTFSSQNDGFISMNEIFPNEENFNTYLPCAKRQKLCYEEKKVQQQEEILNSTNFFVDEFMTNPFGSFEAEQPFCSASKIVGCEKKVYEKTISSQSIVARERRRKITEKTQELGKLVPGGPKMNTAEMLIGAANYVKFLQAQVGMLQVMGTLSKEEKEPPPSQDIHKLLVSPFVQEKLYLEEKCFVTKEFITTLTNHDNVRSKPTILKGLKQLIGTEINEKKPKQE* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3160 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 222 IPR011598 GO:0046983
Tpr7g3160 309 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 3 294 - -
Tpr7g3160 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 231 IPR036638 GO:0046983
Tpr7g3160 309 Pfam Helix-loop-helix DNA-binding domain 179 223 IPR011598 GO:0046983
Tpr7g3160 309 SMART finulus 179 228 IPR011598 GO:0046983
Tpr7g3160 309 Gene3D - 172 241 IPR036638 GO:0046983
Tpr7g3160 309 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 3 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3160 Tpr-Chr7 39181776 39186302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3160 1 301 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G34820 33.438 5.44e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g3160 HLH 3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3160 - - mtr:MTR_1g060700 428.713