Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3151 ATGGACAATTCAGAGCAGAATCAACAGCAGCAACATGTGATGGGAGTTGCGCCAAACGATAGCCAAATGACCTATTCTTCTCACTACCAGACTGTTCCCATGATGGCTTCTGGCACACCTGCTGGCGCTATTCCTACCGCAACACATCCTCCCGCAACCTTCTCTAATTCCGCCCACCAGTTCGCATACCAGCAAGCACAACATTTCCACCATCAACAGCAGAATCAACAACAACAGCAGCTTCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAGCAAACATTTGACTTTAAAAATCATACTCTCCCACTTGCCCGTATAAAGAAAATAATGAAAGCTGACGAAGATGTCAGGATGATTTCGGCAGAAGCTCCAGTTGTATTTGCTAAAGCATGTGAAATGTTCATATTAGAATTGACTTTGCGATCTTGGATCCACACAGAAGAGAACAAGAGGAGAACACTACAAAAGAATGATGTAGCGGCTGCTATTGCAAGAAATGATGTTTTTGATTTCTTGGTTGATATCATTCCAAGAGATGAATTGAAAGAAGAGGGGCTTGGAATCGCAAAGGGTACTATTCCAATAATCGGCGCTCCAGCTGATATGCCATATTATTATGTCCCACCACAGCATCATTTAGGCCCTACAGGGATGATCATGGGAAACCCAGTTGATCAAGCAGCACTGTATTCTAACCAGCAGCCTCGACCTCCTATGGCTTTCATGCCCTGGCCAAATGCACACCCTCAGAAACAGCAACCACCGCAACAAACAGACTCTTAA 789 0.4423 MDNSEQNQQQQHVMGVAPNDSQMTYSSHYQTVPMMASGTPAGAIPTATHPPATFSNSAHQFAYQQAQHFHHQQQNQQQQQLQMFWANQMQEIEQTFDFKNHTLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDVAAAIARNDVFDFLVDIIPRDELKEEGLGIAKGTIPIIGAPADMPYYYVPPQHHLGPTGMIMGNPVDQAALYSNQQPRPPMAFMPWPNAHPQKQQPPQQTDS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3151 262 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 5 257 - -
Tpr7g3151 262 Gene3D Histone, subunit A 63 180 IPR009072 GO:0046982
Tpr7g3151 262 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 102 165 IPR003958 -
Tpr7g3151 262 MobiDBLite consensus disorder prediction 1 22 - -
Tpr7g3151 262 SUPERFAMILY Histone-fold 58 174 IPR009072 GO:0046982
Tpr7g3151 262 MobiDBLite consensus disorder prediction 237 262 - -
Tpr7g3151 262 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 5 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3151 Tpr-Chr7 39066743 39069695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3151 81 209 CCAAT-HAP5 Transcription Factor Family AT1G56170 86.923 9.43e-81 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Tpr7g3151 CBFD_NFYB_HMF 5.7e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3151 K08066 - gmx:100799981 390.963