Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3125 ATGGAAAGAATGTTCCCTCCAAAGAAGCCTTCAACTATGAATTCACATGATAGACCCATGTGTGTTCAAGGTGACTCAGGACTTGTTCTTACCACCGACCCGAAACCTCGTCTTCGATGGACTGTTGAACTCCATGAACGTTTTGTTGATGCTGTTACTCAACTTGGAGGACCTGATAAGGCCACTCCTAAAACTATCATGAGGGTTATGGGTGTCAAGGGTCTCACCCTTTACCATCTCAAGAGCCATCTACAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGATCACTCAATTAAGGATGCTACAGCTTTAGAACTGCAACGAAATACTGCTTCCTCTTCAGCCATGATTGGCCGCAACATGAATGAGATGCAAATTGAGGTGCAAAGAAGACTTCATGAGCAGCTTGAGGTGCAAAAACACCTTCAGCTAAGGATTGAAGCTCAAGGGAAATACATGCAAAGTATATTGGAGAAGGCTTATCAAACCCTTGCCGGCGAAAACATGGCGTCGGCTGCAACTAACCTAAAAGGTGTTGTCGTTGGACCTCATGGAATACCTGAAATGGGACTATTGAAAGAATTTGGCTCACCACTTAGTTTCTCATCTTTTCAAGATCTTGATCTTTTCGGAGGCGGTGGCGGTGATCAACTTGACCTTCAACAAAACATTGAAAAACAAACCCTAGATCATCATGGATTTCTACAAATCAATGATAATCTATGTCTTGGCAAGAAGAGGCCAAACCCTAACAATAACCCTTATAGTGGAAATGGAAAAAGTCCTTTAATGTGGAGTGATGATTTAAGGCTTCAAGATTTAGGAACACCTTCATCATGCTTAGATGATCCTTTCAAAGGTGATCAAATTCAAATTGCACCGCCATCAATGGATAGAGGAAGTGATATTGAAACTATAGATATTTATGATACAAAGCAATTACTTCAAGGTGATATTTTAAATGAAAAGAAATTTGATGCAATGAATAAACTTGAAAGGCCATCACCAAGAAGAGGGCCACTTCATGCTGAAAGAATGAGTCCCATGATTAGTACCGGTTCTATGGCACAAGGTAGAGGCTCACCATTTGGATGA 1107 0.4101 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDATALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASAATNLKGVVVGPHGIPEMGLLKEFGSPLSFSSFQDLDLFGGGGGDQLDLQQNIEKQTLDHHGFLQINDNLCLGKKRPNPNNNPYSGNGKSPLMWSDDLRLQDLGTPSSCLDDPFKGDQIQIAPPSMDRGSDIETIDIYDTKQLLQGDILNEKKFDAMNKLERPSPRRGPLHAERMSPMISTGSMAQGRGSPFG* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3125 368 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Tpr7g3125 368 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Tpr7g3125 368 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 317 IPR044848 GO:0003700
Tpr7g3125 368 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Tpr7g3125 368 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Tpr7g3125 368 Gene3D - 34 92 - -
Tpr7g3125 368 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 317 - -
Tpr7g3125 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3125 Tpr-Chr7 38712308 38715091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3125 4 368 G2-like Transcription Factor Family AT1G79430 57.584 3.68e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr7g3125 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3125 - - ccaj:109805894 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3125 7 38712308 38715091 Tpr7g3125 7 38712308 38715091 ECH
Tpr7g3125 7 38712308 38715091 Tpr7g1441 7 15794917 15797776 PCT