Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3115 ATGTTGCAACAACCGCAACCACCACCTCTCCCCGCCGTTAGGGCACGTTGCGCCGGTTGCCGGACATACTTTCACGCGGCGCAAGGTGTGACGGAGCTACCATGTCCTAACTGTCAAATGCCACACGTTTTCTCACTCGATCCGGCCGCTATTCGCTGTCCTGCTTGTAAGGCTCTCGTTAACTGTCCTAGTAAACTCGCGAAGTTCCCTTGTCCTCAGTGTCGCGTTGAACTTGATGTTCATGTTGATGGTGAAGACGTCAATGAGCTGCTTAATGAGGTGGAGCAGGACGAAGATGATGGTGGTATGGCTGGAGAAACATTTACAGATTATCGGCCAGCAAAGCTATCTATCGGACCTCTACATCCAGATCCGATTGTGGAAACATCTTCATTGTCTGCAGTGCAGCCACCTGAGCCTACTTATGATCCAAAGATTAAGGATGAGTTGCAATGTTTGAAGACTTTGTCATGCTTGCAGATTGAAACTTTGGTCTATGCTTGTCAGAGACACCTTCAACACATTCAAGATGGTGCTAGGGCAGGATTCTTTATCGGAGATGGAGCGGGTGTAGGTAAAGGTCGAACAGTTGCTGGGCTAATCTGGGAGAACTGGCACCATGGGAGGAAGAAAGCCTTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCCAGAAGAGATTTGGATGATATGGGTGCAAGTTGCATTGAAGTGCATGCTTTGAACAAGCTGCCTTATACCAAGCTTGACACGAAGACTGTTGGAGTTAGGGAGGGAGTTATTTTCTTGACATACAGTAGCCTCATAGCATCATCTGACAAAGGGCGTACCCGTATGCAGCAGCTTGTGCAGTGGTGTGGATCTAAGTTTGACGGTCTTATAATTTTTGATGAGTGTCATAAAGCAAAGAATTTGGTTCCTGAAAAGGGTAAGAAGTCAACAAGAACCGGTGAAGCAGTACTTGATATCCAGGCTCAACTACCTGAAGCTCGTGTTGTTTATTGCTCAGCTACTGGTGCATCTGAACCTCGCAATATGGCTTATATGGTTCGACTTGGCCTTTGGGGAGTTGGCACTTTTTTCAGTGATTTTGGTGAATTTCATGATGCGCTTGAAAAAGGAGGTGTCGGAGCTCTAGAGCTAGTTGCAATGGACATGAAAGCAAGGGGCATGTATTTATGCCGTACGCTTAGCTACAAGGGTGCTGAGTTTGAAGTTATTGAAGCAACATTAGACGATAAAATGACGAATGCGTATAAAACGGCTACAGAAGTTTGGGTGGATTTGCGTCAGAAATTGCTTTCTACCATTTCCCTCCTACCTGAGAAACCTAATACTAGACTACTATGGAGATTATACTGGGCAACCCACCAGCGCTTCTTTAGACATTTGTGTATGTCTGCTAAAGTCCCAACTGCAGTGAGACTGGTGAAGCAAGCATTAAGAGAAGACAAGTGTGTAGTGATAGGTCTGCAGAGTACTGGTGAAGCAAGGACGGAGGAAGCTGTTTCAAAATACGGTTCTGAACTTGATGACTTTATTTCTGGACCTCGTGAGTTAATGCTAAAATTTGTTGAAGATTATTACCCTTTGCCAAAAAAGCCTGAACTTCTCCCAGATGATGGTGTAAAGGAGCTTCAAAGGAAGAGGCACTTGGCAAGTCCTGATGTTTCAGGAAAATCTAGAGCCAGAAAAGTAGCCAAGTTGCTGCATCCTAGTGATGCTGACAGTGATGAAGAATCTGAAACTGCCTCTGTTCCTGAATCTTCTGATTCTGATTACGGACCAGAAGGGGATGAAAGTGATGCAGCTGCCTCTGATGTTGAATCTTCCGACTCTGATTATGACGAGTTTCAGAAATGTGAAATTTGCAGTACTGAAGAGGAAAGGGAAAACTTGTTGCAGTGTTCTTGCTGTGGAAAATACGCTCATCAATCATGCTTGGTGCCCCCAATTCGCGATATTATTCTTAAGGAATGGGCATGTAATTTGTGCAAGAATAAAACTGTTGAATATCTGCCTCCTGGAACAAACATAATTGAACAGCAAAAGAGTTATGATATAGCCGTAGATGACAAGAAGAAAATATTAGAGATGATTCGTGCTTTGGATCTTCCAAACAATCCCTTGGATGATGTTATTGACCAGTTAGGAGGCCATGAAAAAGTTGCCGAAATTACAGGAAGGAAAGGAATGCTTGTGAGGGCCCCTAGTGGAATGGGTGTGGTTTATCAGACTCGAAATACAAAAGATGTCACTGCTGAGATGGTCAACATGAATGAAAAAATGCTCTTCATGGAAGGTAAGAAGTTAGTGGCTATCATCTCTGAAGCTGGATCAGCTGGCGTTTCGTTGCAGGCAGACAGAAGAGCGAGAAATCAGAAAAGAAGGGTTCATTTAACTCTAGAACTTCCATGGAGTGCCGACCGAGCAATTCAGCAGTTTGGAAGAACTCATAGATCAAATCAAGTCTCAGCACCAGAATACAGGTTACTATTTACCAACCTTGGTGGAGAACGCCGGTTTGCATCAGCTGTTGCCAAGAGACTAGAATCCCTTGGAGCTTTGACTCAAGGGGATCGTAGGGCTGGACCTTCATTAAGTGCATATAATTATGATAGTGCTTATGGGAAGCGGGCTCTGATGGTTTTGTATAGAGGAATAATGGAGCTGGATCCTCTTCCCGTTGTACCTCCAGGATGCTTATCTGACAGACCAGATACAATCAAAGGTTTTATTATGCAGGCAAAAGCTGCTATTGCTTCTGTTGGAATTTTTAAGGACGCCAGTCATGGAGATGATATAGATCCTAGATGGCTATCTTGCCACATTGATGATAAAGACATACATGATATTGGGCGATTTCTCAACCGGATTTTGGGAATAGCTCCTGAGACTCAGAATAGGCTATTTGAGTTATTTGTGAATATCTTGGATCTTCTTGTTCAAAAAGCTCGGATTGAAGGTAACCTTGACACAGGCATTATTGACTTGAAAGCTAATATCATTAAACTGAAAGGGACTCCAAAAAATGTCTATGTTGATCAAATGAGTGGGGCTTCAACTATTCTGTACACATTCATCTTGGATCGTGGGGTTTCATGGGAGTTGGCAAATACCATGCTGAATGAGACACAAAAAGCTGGATTTGGCTCATCTGGTGATGGCTTCTACAAGTCCAAGAGGGAGTGGTTGGGAAAACGTCATGTAATTTTAGCATTTCAAAGTTCTGCTCCGGCTATGTATAAGATAGTTCGTCCAACTACCGGAGAATCGCCTCGGGATATGCATCTGGCAGAATTAACTAGAAAATATTCAAAAGTTTCATCTTTAGAGGCGGCCAAAATTGGTTGGGAGGACGACTATGAAGCTTCATCTAAACGGTGCATGCATGGTCCCAAGTGTAAACTTGGTAAATTCTGTTCAGTTGGCTCAAGACTACAAGAAGTAAATGTCTTAGGTGGTGTCATTCTTCCTGTTTGGGGAAAAATACAAATGGCTCTTTCTAAGCAGGTCCGACAAATTCATAAGAGGTTACGCATTGTTCGTGTTGAAACTACATCAGATAACAGACATATAGTTGGGCTTCTTGTACCTAATGCAGCAGTTGATACTGTGCTTGAAGGTTTACATTGGCCTATAGAACTGGATGATTGA 3660 0.4339 MLQQPQPPPLPAVRARCAGCRTYFHAAQGVTELPCPNCQMPHVFSLDPAAIRCPACKALVNCPSKLAKFPCPQCRVELDVHVDGEDVNELLNEVEQDEDDGGMAGETFTDYRPAKLSIGPLHPDPIVETSSLSAVQPPEPTYDPKIKDELQCLKTLSCLQIETLVYACQRHLQHIQDGARAGFFIGDGAGVGKGRTVAGLIWENWHHGRKKALWISVGSDLKFDARRDLDDMGASCIEVHALNKLPYTKLDTKTVGVREGVIFLTYSSLIASSDKGRTRMQQLVQWCGSKFDGLIIFDECHKAKNLVPEKGKKSTRTGEAVLDIQAQLPEARVVYCSATGASEPRNMAYMVRLGLWGVGTFFSDFGEFHDALEKGGVGALELVAMDMKARGMYLCRTLSYKGAEFEVIEATLDDKMTNAYKTATEVWVDLRQKLLSTISLLPEKPNTRLLWRLYWATHQRFFRHLCMSAKVPTAVRLVKQALREDKCVVIGLQSTGEARTEEAVSKYGSELDDFISGPRELMLKFVEDYYPLPKKPELLPDDGVKELQRKRHLASPDVSGKSRARKVAKLLHPSDADSDEESETASVPESSDSDYGPEGDESDAAASDVESSDSDYDEFQKCEICSTEEERENLLQCSCCGKYAHQSCLVPPIRDIILKEWACNLCKNKTVEYLPPGTNIIEQQKSYDIAVDDKKKILEMIRALDLPNNPLDDVIDQLGGHEKVAEITGRKGMLVRAPSGMGVVYQTRNTKDVTAEMVNMNEKMLFMEGKKLVAIISEAGSAGVSLQADRRARNQKRRVHLTLELPWSADRAIQQFGRTHRSNQVSAPEYRLLFTNLGGERRFASAVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKRALMVLYRGIMELDPLPVVPPGCLSDRPDTIKGFIMQAKAAIASVGIFKDASHGDDIDPRWLSCHIDDKDIHDIGRFLNRILGIAPETQNRLFELFVNILDLLVQKARIEGNLDTGIIDLKANIIKLKGTPKNVYVDQMSGASTILYTFILDRGVSWELANTMLNETQKAGFGSSGDGFYKSKREWLGKRHVILAFQSSAPAMYKIVRPTTGESPRDMHLAELTRKYSKVSSLEAAKIGWEDDYEASSKRCMHGPKCKLGKFCSVGSRLQEVNVLGGVILPVWGKIQMALSKQVRQIHKRLRIVRVETTSDNRHIVGLLVPNAAVDTVLEGLHWPIELDD* 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3115 1219 MobiDBLite consensus disorder prediction 549 613 - -
Tpr7g3115 1219 PANTHER STRAWBERRY NOTCH-RELATED 89 1219 IPR026741 GO:0006355
Tpr7g3115 1219 SMART PHD_3 621 667 IPR001965 -
Tpr7g3115 1219 Pfam PHD-finger 622 669 IPR019787 -
Tpr7g3115 1219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 364 IPR027417 -
Tpr7g3115 1219 SUPERFAMILY FYVE/PHD zinc finger 608 670 IPR011011 -
Tpr7g3115 1219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 563 673 IPR013083 -
Tpr7g3115 1219 PANTHER OS08G0223700 PROTEIN 89 1219 - -
Tpr7g3115 1219 MobiDBLite consensus disorder prediction 594 613 - -
Tpr7g3115 1219 ProSiteProfiles Zinc finger PHD-type profile. 619 669 IPR019787 -
Tpr7g3115 1219 Pfam P-loop containing NTP hydrolase pore-1 122 421 IPR039187 -
Tpr7g3115 1219 MobiDBLite consensus disorder prediction 549 579 - -
Tpr7g3115 1219 Pfam C-terminal domain on Strawberry notch homologue 709 998 IPR026937 -
Tpr7g3115 1219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 766 869 IPR027417 -
Tpr7g3115 1219 Gene3D - 156 352 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3115 Tpr-Chr7 38574428 38590667 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Tpr7g3115 AAA_34 2.2e-131 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3115 - - gmx:100808670 1761.12