Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3103 ATGGCCAATTCTGAGTGGTCTCAAATTCTGTTCATAATATTGGGAACCCTTTTCATATGCAACATCAATTTTGCATTTGCAACAGACCCATTTCTTCAACAAAACAAAGACAGGGTTAATGAGGCACTCCCAGGTCAAAACTTCAACATCAACTTTAAACACTATTCTGGGTATATCACAGTGAACGAGGATGCTGATAGGACACTGTTTTACTGGTTCATTGAAGCAGATCATGTAGATCCTACTTCAAAACCACTGCTTCTATGGCTTAATGGTGGTCCTGGTTGTTCATCTATTGCTTATGGTGAAGCTGAGGAATTTGGTCCTTTTCATATTAATTCAAATGGCACCCTTTATCTTAATCCTTATTCTTGGAATCAAGTTGCCAACATTCTTTATATTGACTCTCCTATTGGAGTTGGATTTTCATATTCAAAGAATTCATCCGACATTCTCAACAGTGGTGATAAGAGGACAGCTGAGGACAATCTCATATTTCTATTGAAATGGTTTGAGCGTTTTCCCCAGTATAAAGAAACTGAATTTTACATCGGTGGTGAAAGCTATGCAGGGCATTTTGTTCCCCAACTTAGCCAACTTATTGTCAAGCACAACTCAGCTACAAAACAAAATTCTATAAATCTGAAAGGTTACATGGTAGGAAATGCTCTAACCGATGATTTCAATGATCAATTGGGGATTTTCCAGTTTATGTGGGCAACTGGTATGATTTCGGATCAAACATTCAAGCTCTTGAACCTACTATGTGATTTTCAGTCAGTCGAACACCCATCACAATCATGTCAAAAAATGTTGGATATTGCTGATGATGAATTGGGTAATATAGACCCATACAGTATTTTTACCCCTCCTTGCCATGGTAGTGCTAATCAGCGGCTTAAAAGAACGCTTAGTGTTGGAAGACTCAGAAGTGTGTATGATCCTTGCACAGAGAAGCACAGCACTATATACTTCAATCGACCAGAGGTCCAGAAGATTCTACATGTTGATCCAGATCATAAACCTGCTAAATGGGAGACCTGCAATGATGACGTATTTTCAAACTGGAAGGATTCACCTAGAACAGTGCTCGATATATATCGTGAACTTATTCCTACTGGCCTGCGAATATGGATGTTCAGTGGTAATACAGATTCTGTACTCCCGGTAACATCTACTCGCTATACCATAGCCGCTCTCAAGCTTCCAACTGTGAGCCCTTGGCGTGCATGGTATGATGACGGAGAGGTAGGAGGATGGACTCAAGAGTACGCCGGACTCACGTTTGTAAACGTAAGGGGTGCAGGGCATGAAGTTCCTCTGCATAGACCAAAACTTGCTCTAATACTGTTCAAAGCCTTCTTAGCAGGAACTTCCATGCCAACTCTTGAACCACTCTCACTCACCGCCGCCTATTGA 1419 0.4094 MANSEWSQILFIILGTLFICNINFAFATDPFLQQNKDRVNEALPGQNFNINFKHYSGYITVNEDADRTLFYWFIEADHVDPTSKPLLLWLNGGPGCSSIAYGEAEEFGPFHINSNGTLYLNPYSWNQVANILYIDSPIGVGFSYSKNSSDILNSGDKRTAEDNLIFLLKWFERFPQYKETEFYIGGESYAGHFVPQLSQLIVKHNSATKQNSINLKGYMVGNALTDDFNDQLGIFQFMWATGMISDQTFKLLNLLCDFQSVEHPSQSCQKMLDIADDELGNIDPYSIFTPPCHGSANQRLKRTLSVGRLRSVYDPCTEKHSTIYFNRPEVQKILHVDPDHKPAKWETCNDDVFSNWKDSPRTVLDIYRELIPTGLRIWMFSGNTDSVLPVTSTRYTIAALKLPTVSPWRAWYDDGEVGGWTQEYAGLTFVNVRGAGHEVPLHRPKLALILFKAFLAGTSMPTLEPLSLTAAY* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3103 472 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Tpr7g3103 472 Gene3D - 316 354 - -
Tpr7g3103 472 Gene3D alpha/beta hydrolase 34 294 IPR029058 -
Tpr7g3103 472 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 13 464 - -
Tpr7g3103 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 464 IPR001563 GO:0004185|GO:0006508
Tpr7g3103 472 Gene3D - 363 457 - -
Tpr7g3103 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Tpr7g3103 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Tpr7g3103 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Tpr7g3103 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Tpr7g3103 472 Pfam Serine carboxypeptidase 44 456 IPR001563 GO:0004185|GO:0006508
Tpr7g3103 472 SUPERFAMILY alpha/beta-Hydrolases 41 460 IPR029058 -
Tpr7g3103 472 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3103 Tpr-Chr7 38352306 38357985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3103 343 460 Calmodulin-binding Proteins AT2G22960 27.200 1.07e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3103 K16297 - gmx:100805227 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3103 7 38352306 38357985 Tpr7g3103 7 38352306 38357985 ECH