Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3100 ATGCCTATCAAAATGCCTGATCATCCAGAGATGAATCACAATAGATCGGATGAACATTCTGAGACAAAACACAATGTTCATCATAGTTATCAGAAGAATCACAATATATCAGAAGAATCTCATGAAACAAATCATTCTGAGGCAAAACACAGTGTTCATAGTTATCCAAGTTCGGGAAACAATTCGCCAACTTATTCCAAAAAGGCGAATCAAGAAGGAAAAGGTGCATTCACAAATGATTATTCATCAAGTGAAGCTACTAAAGATATGGATCAAGTTTCTAAAACAGATGAAAAATTTACAAATAAAACTCGACCACAGAAAATAACTCCACCAAACAAAAACATTTCTGATGCTTTTACAAAACAAAGTCCAAGGACAAAGATGCCTATAAGTGCTGATCCTCCAACTCCAGGAATTTCAAAGGGTATGCCTACTCATACAAAGAACAACAGTCAAAGTGGACCTGGAAGTGGAACTAGCTCACGCAGCGACAGTTTAGAGAGCACAAGTTGTTCTTCAAACATTAGGCCACATACTGGTGGTGATGTTAGGTGGGATGCAATTAACATGGCTTTGAAAAATGGTCCTCTTAATCTTAGCCATTTTCGACTTCTTAAGCGTATCGGTTATGGAGACATTGGAAGTGTGTATCTTGTCGAACTTAAAGGAACTGATGCTCATTTTGCTATGAAAGTAATGGACAAGGCTGCTCTTATAAGTAGAAACAAACTTCTTAGATCACAAACTGAAAGGGAGATTCTTGGTCTTCTTGATCATCCCTTTTTGCCTACTTTGTATTCTTACTTTGAAACTGATAAGTTTTACTGTCTCGTTATGGAGTACTGTAGTGGCGGTGATCTTCATTCGCTTCGACAGAAACAACCAAATAAGTGTTTCACTGAAGAAGCTGCAAGGTTCTATGCTTCCGAGGTTTTGTTAGCTCTCGAGTACCTACACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTTTAGTTAGAGATGAAGGTCACATCATGCTCTCAGATTTTGATTTATCGCTTCGCTGCTCTGTCTGTCCTACACTTGTCAAGTCTTCATCTACTCACGCAGCAAGCGGCAGCGGCAGTGATTATGGAAGTATATTAAATGATGACCAAGCAGCTGCTCAGCCATCAACAGGCTTCTTCCCTCGGATTTTACCTTCAAAAAAGAATCGGAAGGCAAAATCAGACTTCGGTCTACTGGTTAACGGAAACCGTCTTCCCGAACTAATGGCAGAACCAACCAATGTGAGATCAATGTCTTTTGTAGGTACACATGAATATCTTGCACCTGAAATCATCAAAGGAGAAGGACATGGTAGTGCAGTAGATTGGTGGACTTTCGGAATCTTCTTGTACGAATTGTTGCACGGTGCAACGCCTTTTAAAGGCGCAGGATATAAAGCAACACTATTCAATGTTGTTGGACAGCCATTAAGGTTTCCAGATAGTCCTCAAATTAGTCCTGTGGCTAAAGATCTTATTAGAGGATTGTTGGTGAAGGAACCTCAGAAGAGAATTGCATACAAAAGAGGAGCAACAGAAATAAAACAGCATCCATTTTTTGAAGGAGTGAATTGGGCTCTAGTTAGAAGTGCAACACCACCACATATACCAGATATGATAGACTTTTCAAAGTATGCTAAAAAAGAAACAGCACCACCACCAGTTGCTGATAAGAAGATGCCAGAAATTGCTAGTGATAAAATTCCTAGTGATAAAAAATGCAAAAATTCAACTGATAATTCTTATGTAGATTTTGAGTATTTTTAG 1806 0.3887 MPIKMPDHPEMNHNRSDEHSETKHNVHHSYQKNHNISEESHETNHSEAKHSVHSYPSSGNNSPTYSKKANQEGKGAFTNDYSSSEATKDMDQVSKTDEKFTNKTRPQKITPPNKNISDAFTKQSPRTKMPISADPPTPGISKGMPTHTKNNSQSGPGSGTSSRSDSLESTSCSSNIRPHTGGDVRWDAINMALKNGPLNLSHFRLLKRIGYGDIGSVYLVELKGTDAHFAMKVMDKAALISRNKLLRSQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEYCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVCPTLVKSSSTHAASGSGSDYGSILNDDQAAAQPSTGFFPRILPSKKNRKAKSDFGLLVNGNRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGATPFKGAGYKATLFNVVGQPLRFPDSPQISPVAKDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGVNWALVRSATPPHIPDMIDFSKYAKKETAPPPVADKKMPEIASDKIPSDKKCKNSTDNSYVDFEYF* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3100 601 MobiDBLite consensus disorder prediction 143 178 - -
Tpr7g3100 601 Gene3D Phosphorylase Kinase; domain 1 201 286 - -
Tpr7g3100 601 Gene3D Transferase(Phosphotransferase) domain 1 287 354 - -
Tpr7g3100 601 MobiDBLite consensus disorder prediction 105 130 - -
Tpr7g3100 601 MobiDBLite consensus disorder prediction 90 104 - -
Tpr7g3100 601 CDD STKc_phototropin_like 201 554 - -
Tpr7g3100 601 MobiDBLite consensus disorder prediction 564 590 - -
Tpr7g3100 601 MobiDBLite consensus disorder prediction 1 178 - -
Tpr7g3100 601 MobiDBLite consensus disorder prediction 8 49 - -
Tpr7g3100 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 324 336 IPR008271 GO:0004672|GO:0006468
Tpr7g3100 601 ProSiteProfiles Protein kinase domain profile. 203 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3100 601 PANTHER FLIPPASE KINASE 1-RELATED 42 601 - -
Tpr7g3100 601 Pfam Protein kinase domain 204 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3100 601 Pfam Protein kinase domain 407 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3100 601 SMART serkin_6 203 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3100 601 MobiDBLite consensus disorder prediction 50 89 - -
Tpr7g3100 601 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 42 601 - -
Tpr7g3100 601 Gene3D Transferase(Phosphotransferase) domain 1 408 551 - -
Tpr7g3100 601 SUPERFAMILY Protein kinase-like (PK-like) 192 553 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3100 Tpr-Chr7 38322043 38326049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3100 167 601 AGC Kinase Gene Family AT1G79250 72.606 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr7g3100 Pkinase 2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3100 - - gmx:100819001 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3100 7 38322043 38326049 Tpr7g3100 7 38322043 38326049 ECH
Tpr7g3100 7 38322043 38326049 Tpr7g1459 7 16177260 16180256 PCT