Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3089 ATGGCGTCTGGTTACATTGCACGTTTCATCTTCTTCGTGATTTTGATTTCTTTGGCAGATTCCTCACATGTGAAGGACCTACACAAGACCTTGAACTACTCACCGGTGCTCCAAGGATGGAAAGGAGTTGGAGGCTTGCTCCACAATCTACAAAACTTGCAACATCTTGATGTCTGCTCTAACAACATAGTGGGTGTGATACCAATACCATTCCGTCTGCCTCCCAATGCCACACATATGAACATGGCTTGCTGCATCTATTTGTGCAAAAATATCCGTCAGTCATTATCAACAACGAAGAAACTAAGGCATCTGAATTTAAGTCACACTTTCTTATTTGGACCCATTGGCAATGTGTTCACTGGCTTAGATAACCTGGAAGAAATTGATGTCAGCTCTCACAACATAGTGGGTGTGATACCAATACCATACAGTCTGCTTCCCAATTCCACTCATATGAACATGGCTTGCTGCATCTATTTGAGCAAAAATATCTCCCATTCTTTATCAACAACGAAGAAACTAAGGCATCTGAATTTAAGCCACAATTTCTTGTTTGGACTCGTTGGCAATGTGTTCACTGGCTTAGATAACCTGGAAAAAATGAACATTCAACAGAATCTGTTTAGTGGTATTCTTCCAGAAAATGTCCAGACCATACCAAACTTATGGATTGGAGGGAGTAAGTTATATCCATTGGGTGACTCTCCTCTCTGGGAATTTCCTTTTGAATATGTTATAGTTGAGCACAGTAGCAGTTGCCCACACACAACTCAGGCAAATGCCAATGAAAACTTTGTGAGAAAACATGAGAAGATCCCCATGGGTCGTGGAGGAATAGCTTTTATGGTTGACGGAGGAACATTATTGGCAAAAGGATTCACCTTATTATTGGAAACAGGATTCGCCTTCTTCATTCTAATTCATTTTAATAAATTGCTGTTGAGGCTGAGGAGCTTTGGAAGCAGTCATATTACACTGGTGTCTCATCCTGTTTATGCAGCCGAAGATGATCAAGTTAGAATGTATTTGAACAAGAGATCAAGCCATACAAAGTTACTCATGCTAAAGGCTATGCAGCAAGGTCGTCGTAAAAAACGAAAGACAACCAAGGCAGAAAGTAGTGGAGGAAGAAGTGCTGAAAACACACCAGCTGTGCCAAGAAAAAAGGCAGTTTTAATTGGGGTGATGTATTACAAGTTTGGAGAAGATAGACTGTTGCATACCTTAGATGAAGTCGAAGGGATGAAAACAATTTTAATGGAAAACTTCAATTTCATAGACCAAGATATCACGATACTGTGTGACACCAACAAGTATACGCATCCAACAAAAGTGGCAATTCAAAGACAACTAACATTGTTAGTTGAAGAAGCTAATGCACAAGATATACTTTTTGTGTATATAGCGGGACATTCCATTGAGTTTGAAGTTGATAAATTTGGAATTTGGACTTCCGATTCTAAATTTATAACGGATCATTTTTTGTCTACAAAATTCATGCCGAAAGTGCCGCTGGAAGCGACACTAACAGTGATGATCAACACTTGCTTTGCCGGGAATTTTACGAAAGGTGCAATACAAAGCGTAAACGTGGTAGTCTTTCCACTTAGTGAATCTCATGAAGTCACCTTCGATGGACATATATATTATGAAGTTCTCAGTGGAATACTCGAAGGAGAAACTTCAACCAACATCAAGGTTTATAGACAACTTAAGAAGGCTGTGTGTGCTTTAGTTATAATGGGATATGATGGTCTTCCAGTCTACTGCCCAGAAGACCTTCCATTCTACTGCCCACAAGACAAGAAACATGCTAAGTTCCTACGATGGTAG 1836 0.3987 MASGYIARFIFFVILISLADSSHVKDLHKTLNYSPVLQGWKGVGGLLHNLQNLQHLDVCSNNIVGVIPIPFRLPPNATHMNMACCIYLCKNIRQSLSTTKKLRHLNLSHTFLFGPIGNVFTGLDNLEEIDVSSHNIVGVIPIPYSLLPNSTHMNMACCIYLSKNISHSLSTTKKLRHLNLSHNFLFGLVGNVFTGLDNLEKMNIQQNLFSGILPENVQTIPNLWIGGSKLYPLGDSPLWEFPFEYVIVEHSSSCPHTTQANANENFVRKHEKIPMGRGGIAFMVDGGTLLAKGFTLLLETGFAFFILIHFNKLLLRLRSFGSSHITLVSHPVYAAEDDQVRMYLNKRSSHTKLLMLKAMQQGRRKKRKTTKAESSGGRSAENTPAVPRKKAVLIGVMYYKFGEDRLLHTLDEVEGMKTILMENFNFIDQDITILCDTNKYTHPTKVAIQRQLTLLVEEANAQDILFVYIAGHSIEFEVDKFGIWTSDSKFITDHFLSTKFMPKVPLEATLTVMINTCFAGNFTKGAIQSVNVVVFPLSESHEVTFDGHIYYEVLSGILEGETSTNIKVYRQLKKAVCALVIMGYDGLPVYCPEDLPFYCPQDKKHAKFLRW* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3089 611 Gene3D Ribonuclease Inhibitor 16 138 IPR032675 -
Tpr7g3089 611 Gene3D - 333 575 - -
Tpr7g3089 611 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 43 141 - -
Tpr7g3089 611 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 123 204 - -
Tpr7g3089 611 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 200 302 - -
Tpr7g3089 611 Pfam Leucine Rich Repeat 101 120 IPR001611 GO:0005515
Tpr7g3089 611 Pfam Leucine Rich Repeat 52 76 IPR001611 GO:0005515
Tpr7g3089 611 Pfam Leucine Rich Repeat 174 194 IPR001611 GO:0005515
Tpr7g3089 611 SUPERFAMILY RNI-like 47 223 - -
Tpr7g3089 611 MobiDBLite consensus disorder prediction 359 384 - -
Tpr7g3089 611 PANTHER LEUCINE RICH REPEAT KINASE 2 200 302 - -
Tpr7g3089 611 PANTHER LEUCINE RICH REPEAT KINASE 2 43 141 - -
Tpr7g3089 611 PANTHER LEUCINE RICH REPEAT KINASE 2 123 204 - -
Tpr7g3089 611 Gene3D Ribonuclease Inhibitor 139 230 IPR032675 -
Tpr7g3089 611 Pfam Caspase domain 388 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3089 Tpr-Chr7 38171967 38176728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3089 10 272 Strubbelig Receptor Gene Family AT5G06820 28.205 9.59e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3089 - - cam:101498175 234.572