Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3059 ATGGATTGCCGATTTGAGACTGCAGAAACTCGAAGGAACAAGTGTGCAGCCTGCTACAGGCAGTTCAACAAGGTGGAGCACCTAGTGGATCACATGAAGATATCTTACCATTCTGCTCATGAACCAACTTGTGGCGTTTGCAGGAAACATTGCAGATCCTTTGAGTCTTTAAGGGAACATCTTATAGGTCCATTGCCAAAACAAGAATGCAGAGAAATCTTTGCCAACCGAGGGTGCAAGTTTTGCTTGAAAGTCCTTGATAGCCCTAACTCTCGCAGGATCCATCAACAAAAGTGCCAACTCAATGGATTAAATGGAATATGTGGTCGCTTTTCAAACTTGGGAATTCGCGATAATTTGACAATTGGTGGGGGAAGAGGACCACAAGTAGTTGCACTAGCTTGTAAAATGGTGGGAGGAGGAAGTGATGGTTCATTGGATCTATGTGCAAGAGTTTGCTTAATAGATGAGAATGAGAACATCATCTTCCATTCTTATGTCACTCCACCAATTCCAGTCACAAACTACAGGTATGAGACAACAGGTATAAGACATGAATACTTAAGGGATGCAATGCCATTGAAACTAGTTCAAAGGAAAATTCAAGAGTTCCTTTGCAATGGAGAACCCATGTGGACAATTCGTTCAAGAGGAGGAAAAGCTAGGATTCTTGTGGGTCATGGTTTAGATCATGACCTTGCTTCTTTGCAAATTGAGTATCCAACACCAAAAATAAGGGACACTGCAAAATACCCTCCACTCATGAAAACAAGCAAACTCAGCAATTCACTCAAATACTTAACACAAGCATATCTTGGATATGACATTCAAACAGGGATACAAGATCCTTATGATGATTGTGTTGCAGCAATGAGACTATACATGAGAATGAGGACACAAATACACAAAATAGAAGATTACCCTTTGGCATCTGATCGACAAAATAGAAACAATTTTGCTTCATGGAGGCAAAGTGAGCTTGAAAGAATGAGTCCTGAACAAATGCTAGATATCTCAAGATCTGATTACTACTGCTGGTGCATGGATCCATGA 1053 0.4074 MDCRFETAETRRNKCAACYRQFNKVEHLVDHMKISYHSAHEPTCGVCRKHCRSFESLREHLIGPLPKQECREIFANRGCKFCLKVLDSPNSRRIHQQKCQLNGLNGICGRFSNLGIRDNLTIGGGRGPQVVALACKMVGGGSDGSLDLCARVCLIDENENIIFHSYVTPPIPVTNYRYETTGIRHEYLRDAMPLKLVQRKIQEFLCNGEPMWTIRSRGGKARILVGHGLDHDLASLQIEYPTPKIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGIQDPYDDCVAAMRLYMRMRTQIHKIEDYPLASDRQNRNNFASWRQSELERMSPEQMLDISRSDYYCWCMDP* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3059 350 Pfam Exonuclease 147 293 IPR013520 -
Tpr7g3059 350 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 42 IPR013087 -
Tpr7g3059 350 SUPERFAMILY Ribonuclease H-like 143 300 IPR012337 -
Tpr7g3059 350 SMART exoiiiendus 129 303 IPR013520 -
Tpr7g3059 350 CDD REX4_like 131 294 IPR037431 GO:0006364|GO:0008408
Tpr7g3059 350 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 6 349 - -
Tpr7g3059 350 ProSitePatterns Zinc finger C2H2 type domain signature. 15 37 IPR013087 -
Tpr7g3059 350 Gene3D - 128 315 IPR036397 GO:0003676
Tpr7g3059 350 PANTHER OS02G0709000 PROTEIN 6 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3059 Tpr-Chr7 37806447 37809326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3059 1 349 C2H2 Transcription Factor Family AT3G27970 75.424 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3059 - - gmx:100813973 643.269