Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3049 ATGGAGCTTGGTTTAAGCTTAGGAGATTCTTCAAAGCCTCTAATTGGTTTAATGGAAAAGCATCCTCATGAAGCTTCCAAAGAACTTGGTTTAGGCTTCAACACCACTTTATCAATTGGTCCGATCAACACTGCACAAAGAGATCAACTTCAACAAGAAGAAGAAGAAGAAGATGATGAAAAGACTAAAAGGGACACTGAAAATCCAAACCCTGTATTATTGCATCAGCTTGATCTTCTTCCTCAACTCTCATTACCATGGCATCCTCCTTCTCAAAATGTTGGTAGATTATTATCAACTGAGTTTGGTGGTTCTTCAAGGGGTTTGGATGTGAACGTGGTTCCACCGGTGACAGCGGTTGTTATGGCGGATGATGAAGCCACGCTTTCATCATCACCTAATAGCGCAGCGTCTTATTTTCAAATGGATCTCTGTATATACAATCAAGGAGGAAGTGGCGGCCGTGGTGGTGGGAGTTTGAGTGGCTCAGGAGGGAACAAAAGAGAGTTTTCTGATGGTGATGGTGAAGGTTATGATCAAAGAAACTGTTCAAGAGCTAGTGATGAAGATGATAACTGTGGTGGTGGAAACACAAGGAAGAAGCTTAGGCTCTCAAAAGATCAATCTGCTTTTCTTGAAGAGAGTTTCAAAGAACACCACACTCTTAATCCTAAACAAAAATTGGCTCTTGCAAAACAACTCAATCTTCGACCTCGCCAAGTAGAAGTTTGGTTCCAAAACAGAAGAGCAAGGACTAAGTTGAAGCAAACAGAAGTAGACTGTGAATATTTAAAGAGATGTTGTGAGACATTAACAGAAGAGAATAGGAGGCTACACAAGGAACTTCAAGAATTAAGAGCTTTAAAAACTTCAAATCCATTTCAAATGCAATTACCAGCAACTACTTTAACTATGTGTCCTTCATGTGAACGTGTAGCAACCAATTCTACCGCAACTTCTTCTGTCACTACAAATACCACAATCAATGCTAATAACAAAACAAGTGATGATTCCACTTCAAAGGTCAATATTGGATTCCCTTTTGGAAAACCAAGGTTTCAAAAACAACATCATGAATTGAATTGA 1086 0.3941 MELGLSLGDSSKPLIGLMEKHPHEASKELGLGFNTTLSIGPINTAQRDQLQQEEEEEDDEKTKRDTENPNPVLLHQLDLLPQLSLPWHPPSQNVGRLLSTEFGGSSRGLDVNVVPPVTAVVMADDEATLSSSPNSAASYFQMDLCIYNQGGSGGRGGGSLSGSGGNKREFSDGDGEGYDQRNCSRASDEDDNCGGGNTRKKLRLSKDQSAFLEESFKEHHTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTSNPFQMQLPATTLTMCPSCERVATNSTATSSVTTNTTINANNKTSDDSTSKVNIGFPFGKPRFQKQHHELN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3049 361 ProSitePatterns 'Homeobox' domain signature. 230 253 IPR017970 GO:0000981|GO:0006355
Tpr7g3049 361 CDD bZIP 248 287 - -
Tpr7g3049 361 Pfam HD-ZIP protein N terminus 98 138 IPR006712 GO:0005634
Tpr7g3049 361 PANTHER - 1 339 - -
Tpr7g3049 361 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 1 339 - -
Tpr7g3049 361 Coils Coil 268 291 - -
Tpr7g3049 361 Pfam Homeobox associated leucine zipper 255 289 IPR003106 GO:0006355|GO:0043565
Tpr7g3049 361 SUPERFAMILY Homeodomain-like 189 256 IPR009057 -
Tpr7g3049 361 MobiDBLite consensus disorder prediction 156 200 - -
Tpr7g3049 361 Coils Coil 43 63 - -
Tpr7g3049 361 ProSiteProfiles 'Homeobox' domain profile. 195 255 IPR001356 GO:0003677
Tpr7g3049 361 SMART HOX_1 197 259 IPR001356 GO:0003677
Tpr7g3049 361 Pfam Homeodomain 199 253 IPR001356 GO:0003677
Tpr7g3049 361 Gene3D - 203 253 - -
Tpr7g3049 361 MobiDBLite consensus disorder prediction 46 70 - -
Tpr7g3049 361 CDD homeodomain 199 256 IPR001356 GO:0003677
Tpr7g3049 361 SMART halz 255 298 IPR003106 GO:0006355|GO:0043565
Tpr7g3049 361 MobiDBLite consensus disorder prediction 169 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3049 Tpr-Chr7 37689052 37692170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3049 162 312 Homeobox Transcription Factor Family AT4G37790 68.590 8.04e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr7g3049 Homeodomain 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3049 K09338 - gmx:100805312 419.083