Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3041 ATGGCGCCGAAGGTTAAGAGCGGTGGCGTTAAAGTAAACGCTAACGGTAACATCAATATTAACGGCGGCGTTAAGGAGGCGCATTTTAGAGGAGTAAGAAAGAGACCATGGGGAAGATACGCCGCTGAGATCAGAGATCCAGGCAAGAAAAGCCGCGTTTGGCTCGGAACTTTCGACACGGCGGAAGAAGCGGCGAGAGCTTACGACAGAGCCGCATTCCAATTTCGCGGTCTGAAGGCTAAAACAAATTTTCCTTTCAATAATATCCAAAGTCCTAGCCAAAGCAGCACCGTTGAATCTTCCAGCCGTGACCGTGACGCTGCCGCCGATTCTTCGCCGCTTGATCTAAACTTGGCTCCTGTTCGGTTTCCGTTTCAGAACCGGTATACTCCGATGCCGGAGGTTAATCAGACGTTTTGCTTCGATGATGTTCTACGCGCCGGCATGGTGAATTACGGTTATGCGACGGCGACTGCGATGGCTGCGGCACCAGTGCAGAGTGATTCGGACTCTTCGTCGGTGATTGATCTGAACCACCACCGTGATGACGGTGTTAAAGGTGTTAGAATTTTGGATCTGGATCTTAACTACCCTCCTCCGGAATATACGCTATAA 615 0.5057 MAPKVKSGGVKVNANGNININGGVKEAHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDRAAFQFRGLKAKTNFPFNNIQSPSQSSTVESSSRDRDAAADSSPLDLNLAPVRFPFQNRYTPMPEVNQTFCFDDVLRAGMVNYGYATATAMAAAPVQSDSDSSSVIDLNHHRDDGVKGVRILDLDLNYPPPEYTL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3041 204 MobiDBLite consensus disorder prediction 86 102 - -
Tpr7g3041 204 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Tpr7g3041 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE 1 89 - -
Tpr7g3041 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE 91 186 - -
Tpr7g3041 204 Gene3D AP2/ERF domain 27 87 IPR036955 GO:0003700|GO:0006355
Tpr7g3041 204 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Tpr7g3041 204 SUPERFAMILY DNA-binding domain 28 87 IPR016177 GO:0003677
Tpr7g3041 204 CDD AP2 27 85 IPR001471 GO:0003700|GO:0006355
Tpr7g3041 204 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Tpr7g3041 204 MobiDBLite consensus disorder prediction 86 111 - -
Tpr7g3041 204 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Tpr7g3041 204 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Tpr7g3041 204 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 91 186 - -
Tpr7g3041 204 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3041 Tpr-Chr7 37586671 37587827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3041 1 200 AP2-EREBP Transcription Factor Family AT5G44210 42.105 1.69e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g3041 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3041 K09286 - gmx:100170742 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3041 7 37586671 37587827 Tpr7g3041 7 37586671 37587827 ECH