Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3029 ATGGGTTTGGATTACTATGAAATTTTGGAGGTTGAAAGGAATGCAACAGAAGAAGAGTTGAAAAAAGCTTACAGAAAACTTGCTATGAAATGGCACCCTGATAAAAATCCCAACAATAACAAAGATGCTGAGATTAAATTCAAACTCATATCTGAAGCATATGAGGTTCTAAGTGATCCACAAAAGAGAGCGATTTATGATCAATATGGAGAAAGCGGCCTTAAAAACGGAATGGCACCAACAGATGAAGGTGCAGCTACATACTTCCAAACTCCAGATGGCAGAAGGTTTAGATTCAATCCCAGAAGTGCAAATGGCATCTTTGCAGAAGCTTTTGGTTTTTCAAGCCCATGTGGAGGAATGGGAATGAGGGGTGGCGGCTGCAGAGGCATGAGGGGTCGTTCGTGGGTGTCAAGTGCCTTCGGTGATATTTTTGGCCAAGACATGTTCGCAGAAAGCAGACAAGCAAGCCAAGCGAGCCAAGTTCCAAGGCGCAAGGCACCTCCCATTGAAAATAAATTACCTTGCAGCCTTGAGGAGCTTTATAAAGGTACTACCAAAAAGATGAAGATCTCAAGGGAAATTGCATACGCAAGCGGCAAAACTCTACCTGCGGAGGAAATCTTAACAATTGAAATCCAACCAGGCTGGAAAAAAGGAACAAAAATCACATTCCCAGAGAAAGGAAATGAGCAACCAAATGTTACTGCTGCAGATATTGTATTCATTATTGATGAGAAACCACACAGTGTATTTACAAGAGAAGGTAATGATTTGGTTGTGACACACAAGATATCATTTGCAGAAAGTGAATCTCTAACCAGAAGCTACACCTTCCAACTTACTACTTTGGATGGAAGGGATTTGACCATTGCCATAAACAATTTAATCGATCCAACCTATGAAGAAGTTGTCGCCGGAGAAGGGATGCCAATTTCCAAAAAGCCTTCACAGAAGGGTAATCTTAGGATCAAATTCAACATCACATTCCCAAGCATGGTTGAAGCTGAAACAGAAAGCCAGAATTAA 1029 0.413 MGLDYYEILEVERNATEEELKKAYRKLAMKWHPDKNPNNNKDAEIKFKLISEAYEVLSDPQKRAIYDQYGESGLKNGMAPTDEGAATYFQTPDGRRFRFNPRSANGIFAEAFGFSSPCGGMGMRGGGCRGMRGRSWVSSAFGDIFGQDMFAESRQASQASQVPRRKAPPIENKLPCSLEELYKGTTKKMKISREIAYASGKTLPAEEILTIEIQPGWKKGTKITFPEKGNEQPNVTAADIVFIIDEKPHSVFTREGNDLVVTHKISFAESESLTRSYTFQLTTLDGRDLTIAINNLIDPTYEEVVAGEGMPISKKPSQKGNLRIKFNITFPSMVEAETESQN* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3029 342 Gene3D DnaJ domain 3 157 IPR036869 -
Tpr7g3029 342 Gene3D - 249 332 - -
Tpr7g3029 342 CDD DnaJ 4 59 IPR001623 -
Tpr7g3029 342 Pfam DnaJ C terminal domain 170 331 IPR002939 -
Tpr7g3029 342 PRINTS DnaJ domain signature 6 24 IPR001623 -
Tpr7g3029 342 PRINTS DnaJ domain signature 24 39 IPR001623 -
Tpr7g3029 342 PRINTS DnaJ domain signature 42 62 IPR001623 -
Tpr7g3029 342 PRINTS DnaJ domain signature 62 81 IPR001623 -
Tpr7g3029 342 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Tpr7g3029 342 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 338 - -
Tpr7g3029 342 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 259 IPR008971 GO:0006457|GO:0051082
Tpr7g3029 342 SUPERFAMILY HSP40/DnaJ peptide-binding domain 251 337 IPR008971 GO:0006457|GO:0051082
Tpr7g3029 342 SMART dnaj_3 3 62 IPR001623 -
Tpr7g3029 342 Pfam DnaJ domain 4 67 IPR001623 -
Tpr7g3029 342 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 338 - -
Tpr7g3029 342 Coils Coil 6 26 - -
Tpr7g3029 342 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Tpr7g3029 342 Gene3D - 169 247 - -
Tpr7g3029 342 CDD DnaJ_C 168 332 - -
Tpr7g3029 342 SUPERFAMILY Chaperone J-domain 4 73 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3029 Tpr-Chr7 37498234 37500734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3029 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 5.35e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3029 K09510 - gmx:100794650 462.996