Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3028 ATGGATGCTGAAGAAGCAGAGAACAATACCCAGAAGGGTGATGATGGGGGTGAAAATAGCAATGAGAATTACAATATCAACAATAACAATGGAAGTAATAGCAAAATTATGAGTTCAAGTGAAGGTCAGAGCAAGCCCAAGCGTCAGATGAAAACCCCTTTTCAGCTTGAAATGTTAGAGAAAGCTTATGCTTTGGAGACTTACCCTTCGGAGAGTACGAGGGTAGAGCTGTCGGAGAAGTTGGGGTTGTCGGATCGACAGTTACAGATGTGGTTCTGTCATCGGAGGTTGAAAGACAAGAAGGAGTTACCAACTAAGAAGCCAAAAAAGGTGCCACCTTTGCCGGATTCTCCTACTGATGAACCTAACCCCAAGTTGGTTATTGAGCCCTTAAATGAATATGGATCCGGGTCGGGTTCTGGGTCTAGTCCGTTTGCTCGACCGGAGTTGAGGAATGTTGTGCCTCCTCGGACTTACTATGAGTCGCCGCAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAAGCACAGTTAGGAGAGTCTTTAAGGGAAGATGGACCTATTTTAGGAATTGAGTTTGATCCATTGCCACCTGATGCATTTGGGGCACCATTAGCTGTTGCAGAACAGCAGAAGCGGCCTAGTCTTGCCTACGACAATAAAATATATGAAAGACATGAAGTTAGACCGAATAAGGCAATGGCAAGGACATTCCCTGAATATACATTTGTTCCGAACCAGTCCAGCATTAGATCTGATACGTTTGGGCAATTGAGTCAGCCTCATTTATATGACCCAATGGAGGGTCCTACTAGAACTCCTCCTTTTCCGATTGGAAATGAACATCTACCTAGAACTCATGCTACTCAAAGCCATTCTTCCCGTGCTCGCCTTTCGTCTCAACAGGAAAAACACATGACTCCCTATACTTCCCCTCCCCCGCTTTTGTCTCAACATGACAAAAAAGTGATTCCCTATCCATCTCCTCCTCGAGACAATGATGTTGTCCCCAAAAGGGAACCTCACATAAACATAGCCAATATTGGTATGAACTCCCAATTCACTGATCACCAAATCGTTGGACAAGAAAATTCTTTAGCTTTACCTGGTGGACAAGTTTTCCATAATGATGTGGTGCTGCGTGTGGAGAAGAAACGAAAGAGTGACGATGTCAGAGTTGCAAAGGAAGTTGAAGCCTATGAAATAAGGATGAAGAAAGAACTTGAGAAACAAGATATCCTAAGAAGAAAGAATGAAGAGCGAATGAGGAAAGAAATGGAAAGACAAGATCGTGAGAGAAGGAAGGAAGAAGAGAGGCTGATGCGTGAGAGACAGCGAGAAGAGGAAAGATCAAGGCGTGAGCAAAAGCGGGAGGAAGAACGAAGGGAAAAATATTTGATGAAAGAACATTTAAGAGCTGAGAAAAGGAAGCAGAAAGAAGAGATTCGCAAAGAGAAAGAGGCAGAGAGAAGGAAAGCGGCCCTTGAAAAGGCAAATGCTCGTAGAATAGCGAAAGAATCTATGGAGCTCCTTGAGGATGAACAGCTGGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGGCTGTCCTCTATTATCCAAATTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGGGATTCCTTGTGTGTTTTCCCGCCAAAAAGTGTAAAGCTAAAAAAGCCATTTGCTATCCAGCCCTGGATCAACTCCGATCAAGATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTAATTACCTTTGCTGATGTTCTAGAGTTATGGCCTTTTACTCTTGATGAATTTGTTCAAGAATTTCATGATTATGATTCAAGATTGTTGTGTGAGATACATGTTGCTGTTCTTAAAGTGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTACAGGATTAGGAGTGAACCAGAATGGAGCTGCTAATCCTGCTGGTGGCCATCCAGAGATTGTGGAAGGAGCATATACATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCTGAAATTTTGCGACAGTTAGCACTATCTGCAGGATTTGGACCAAAGCTGAGAAAAAGAAGTATTACGTGGTCATATGCAAATGATAAAGAAGAGGGACGAAGTGGTGAAGATGTCATTTCTACACTCCGTAATGGTTCAGCAGCTGTAAGTGCAGTGGCAAAAATGCAAGAGAAAGGTCTATTAGCTCCTCGAAGATCAAGACATAGGTTAACTCCAGGAACCGTTAAATTTGCAGCATTTCATGTTCTCTCTCTTGAGGGCAGCAAGGGTTTGAATGTACTAGATCTTGCAGAAAAGATTCAGAAATCTGGTCTTCGGGACTTGACAACAAGCAAGACACCTGAAGCATCGATTTCGGTTGCTTTGACTAGAGATGGCAAACTTTTCGAAAGAATAGCTCCATCAACATATCGTGTACGAACTGCATTTAGAAAGGATCCTGTTGATGCTGAGGCCATTCTTTCAGAAGCAAGAAAGAAAATCCAGATATTTGAAAATGGATTTCTAGCTGGTGAAGATGCCGATGATGTTGAAAGAGAAGAAGAGTCAGAAAGTGAGGAAGTTGATGAGGATCCTGAAGACGATGATTTGGTAAATCCTTCAAGTGGAAACCAAAATACAGAACAGTATCATGATATGAACGTTTCTTCAGTAAATGTGACCGAAAATTCGGGCCATGAAGTAGACCTTATTCAAAATGAGCTTGATACCGATCTGCCTTGTTTTCTTGAGAATGGTTCCACTTCCAAGGATGTTGATCTTCCCAGTTCTGTCACCATACAACCCGTTGCTTTTGAAGATCTAAATACTGGAAAACTTGATGACAATAATATGGAAATTGATGAAACCAAGTCTGGAGAATCATGGGTTCAAGGGCTTACCGAAGGAGAATATTCCGATCTTAGTGTAGAAGAGCGTCTAAATGCACTTGTTGCATTGGTTGGGGTGGCAAATGAAGGAAATTCAGTTCGTCTTGTTCTTGAGGATCGATTGGAAGCAGCAAATGCTCTGAAAAAGCAAATGTGGGCAGAAGCACAAATAGATAAAGTTCGTCTAAAAGATGATTATATTAGTAAATTAGATTTCCCACTGCTTGCTGGAAATAAAACTGAAACACAAGAGGGAAACCAAAGCCCATTGCTCGACATCAATATTAACAACATTAAGAATGAAGCTTCACCCAGCACTGCAGAAAACCAAAAAGGAGCTTCTTCTGCACAAAGCCTACTTATTGAAAAGCCATCAACAGTTCAAGATTTCGGCACAGGCACAGGTCCTGATACCTTTCAGAGTCAGGTAGCTGCACAATATTCAAAAAGATCACGATCACAGTTGAAATCCTATATTTCCCACCTAGCCGAGGAGATGTATGTCTACAGATCTTTACCCCTTGGCCAAGACCGCAGGCGTAATCGATATTGGCAATTTGTTGCATCTGCTTCTAGTAATGATCCCGGTTCTGGCAGGATCTTCGTTGAACATCATGATGGCAGTTGGAGACTTATCGATTCTGAAGAGGACTTTGATATTCTTTTGACATCACTGGATTCACGCGGGATCAGGGAATCTCATTTGCGCTTAATGTTGCAAAAGATTCAGAAATCCTTTAAAGAAAATGTTCTAAAAAATACACAATATGCAAAAATCGGAAGCATAGGGGAAGGTTCTATTAAAATTGAAGCTAATGAGAAATATTCAATGCCTGAGCGCCATTCAGGATCTGACAGTCCTAGCAGTACCCTTCATGACTTGAACTCCGGTCCATCCGAAACTTCGTCATCCTTCAAAATTGAGCTTTGGAAAAGTGAGAACGAAAAGAAAGCTGCATTGCGAAGGTATCAAGATTTTCAGAAGTGGATGTGGAAAGAATGCTATAATTCATCAATTTTATGTGCAATGAAATTTGGGGTAAAGAGATGCAAACCTCAGGTGGATATATGTCAAATCTGTCTCAATCCTTATTTTGTTGAAGACTCTCATTGCAATTCCTGCCACAGCACGTTTCCGGCAAATAATGGGTTTGATATTTCTAAGCATGCATTTCAATGTGTTGGCAATTTATCCAAAGATATTGGTATTATGGAGCATTCTCTTCCCATAAGGACTAGATTGCTCAAGGTCCTGCTGTCATATATGGAGGCATCTGTTCTCTCTGAAGCATTTGGAACAATTTGGACAACTGATTTTAGGAAGCGTTGGGGTGTGAAGTTGAGTAAATCATCATCTGTTGAGGAGCTTCTACAGATGTTGACCCTATTTGAAAAAGCACTACGGCGAGATTTTCTGTCATCAGACTTCTCTACAACAGACGAATTGTTGGGATTAAGCAGCAAGTCAAAAAGTTCTGCGCATGTGTCTGCTGATCCTGAATCAGTTGCTCTACTTCCATGGATTCCACAAACCACTGCAGCATTGTCTCTCAGGCTTTTTGAGTTCGATTCATCCATCATCTATGTAAAGCTCGAAAAACTTGAGCCTGTTGAGGAAAAAGAAGCAAGAGAATACATTACGCTTCCATCAAGATATACTCCCTTCAAGCCTAATAGGGAGGTTGAGCCAGCAGCTCTTGATCATGATGGATTAACCAAAGTTAAATCCTCTGCTAAAATTGTACGAAGCAATAAACGTGGACGAGGGGCTAGTGATCATGGGCGGGGTAAAAATCTGTCTAAAAGAATGTACAATTCCAAACGAGATGCTGGCCGTCGAAACGTGAAGTTCACCGAGAATCTAAGTCAAAGACTAAAACAGCAGGGACGAGGAACACAAGGACAAGGAGGTGGACGAGGTCGCCGAACAGTCAGAAAACGTAGAGTAGAAAAAAGAGCTGTTGAAGATTTGTTGCTGGGACATGCAGCTGCCAGTCATAGCTCCATGAGTGGGAGAGAACCATTTAGAGGTTTGCATGAAGAATGGGATGATGGAGAAAAGGCAAGTCCCATGACTCCTGTTCACATTGGGGTTGCTGAAAATAGTAACAGTGCTGAAGAGATGGAATATGATAATGCTCAAGCAATAGAATATGATGATAATGTTCAAGCAGTGGAATCTTATGATAATGCTCAAGCAATGGAATCTGATGATGATGCTCAAGCAGTAGAATATGATCATGGAAACTGGGAGATAGGTTATAATGGTGTCTCTCCTAATGGATGGAATAGGGATTTGGTTGGAATGAGTGATGAAGATGTGGATGGTTTTGAAGATGGCAATGACAACGACAATGGCAATGTTATTGGCTTTGAAGAGAATGAAGAGGAAGATTCCGAGGAAGATGTTATGAGTGAAGGTTCAGATGGCATGGCGAATAGAGTAGAGAATGTAGGAGGCTCATATTTGTCTGTCTCTGAAGATTCTTCTGATTAG 5409 0.4169 MDAEEAENNTQKGDDGGENSNENYNINNNNGSNSKIMSSSEGQSKPKRQMKTPFQLEMLEKAYALETYPSESTRVELSEKLGLSDRQLQMWFCHRRLKDKKELPTKKPKKVPPLPDSPTDEPNPKLVIEPLNEYGSGSGSGSSPFARPELRNVVPPRTYYESPQTIMELRAIACVEAQLGESLREDGPILGIEFDPLPPDAFGAPLAVAEQQKRPSLAYDNKIYERHEVRPNKAMARTFPEYTFVPNQSSIRSDTFGQLSQPHLYDPMEGPTRTPPFPIGNEHLPRTHATQSHSSRARLSSQQEKHMTPYTSPPPLLSQHDKKVIPYPSPPRDNDVVPKREPHINIANIGMNSQFTDHQIVGQENSLALPGGQVFHNDVVLRVEKKRKSDDVRVAKEVEAYEIRMKKELEKQDILRRKNEERMRKEMERQDRERRKEEERLMRERQREEERSRREQKREEERREKYLMKEHLRAEKRKQKEEIRKEKEAERRKAALEKANARRIAKESMELLEDEQLELMELAAASKGLSSIIQIDLDTLQNLESFRDSLCVFPPKSVKLKKPFAIQPWINSDQDVGNLLMVWRFLITFADVLELWPFTLDEFVQEFHDYDSRLLCEIHVAVLKVIIKDIEDVARTPTGLGVNQNGAANPAGGHPEIVEGAYTWGFDIRNWQKNLNQLTWPEILRQLALSAGFGPKLRKRSITWSYANDKEEGRSGEDVISTLRNGSAAVSAVAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLNVLDLAEKIQKSGLRDLTTSKTPEASISVALTRDGKLFERIAPSTYRVRTAFRKDPVDAEAILSEARKKIQIFENGFLAGEDADDVEREEESESEEVDEDPEDDDLVNPSSGNQNTEQYHDMNVSSVNVTENSGHEVDLIQNELDTDLPCFLENGSTSKDVDLPSSVTIQPVAFEDLNTGKLDDNNMEIDETKSGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSVRLVLEDRLEAANALKKQMWAEAQIDKVRLKDDYISKLDFPLLAGNKTETQEGNQSPLLDININNIKNEASPSTAENQKGASSAQSLLIEKPSTVQDFGTGTGPDTFQSQVAAQYSKRSRSQLKSYISHLAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEHHDGSWRLIDSEEDFDILLTSLDSRGIRESHLRLMLQKIQKSFKENVLKNTQYAKIGSIGEGSIKIEANEKYSMPERHSGSDSPSSTLHDLNSGPSETSSSFKIELWKSENEKKAALRRYQDFQKWMWKECYNSSILCAMKFGVKRCKPQVDICQICLNPYFVEDSHCNSCHSTFPANNGFDISKHAFQCVGNLSKDIGIMEHSLPIRTRLLKVLLSYMEASVLSEAFGTIWTTDFRKRWGVKLSKSSSVEELLQMLTLFEKALRRDFLSSDFSTTDELLGLSSKSKSSAHVSADPESVALLPWIPQTTAALSLRLFEFDSSIIYVKLEKLEPVEEKEAREYITLPSRYTPFKPNREVEPAALDHDGLTKVKSSAKIVRSNKRGRGASDHGRGKNLSKRMYNSKRDAGRRNVKFTENLSQRLKQQGRGTQGQGGGRGRRTVRKRRVEKRAVEDLLLGHAAASHSSMSGREPFRGLHEEWDDGEKASPMTPVHIGVAENSNSAEEMEYDNAQAIEYDDNVQAVESYDNAQAMESDDDAQAVEYDHGNWEIGYNGVSPNGWNRDLVGMSDEDVDGFEDGNDNDNGNVIGFEENEEEDSEEDVMSEGSDGMANRVENVGGSYLSVSEDSSD* 1803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3028 1802 Gene3D - 44 102 - -
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 1587 1605 - -
Tpr7g3028 1802 Pfam DDT domain 574 629 IPR018501 -
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 855 878 - -
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 1749 1802 - -
Tpr7g3028 1802 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 10 1802 IPR044977 GO:0006357
Tpr7g3028 1802 SMART testlast3 573 632 IPR018501 -
Tpr7g3028 1802 Coils Coil 398 463 - -
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 1551 1619 - -
Tpr7g3028 1802 ProSiteProfiles DDT domain profile. 573 632 IPR018501 -
Tpr7g3028 1802 ProSiteProfiles HARE-type HTH domain profile. 754 823 IPR007759 GO:0006355
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 1252 1271 - -
Tpr7g3028 1802 SMART HOX_1 44 106 IPR001356 GO:0003677
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 1556 1586 - -
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 287 314 - -
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 1247 1271 - -
Tpr7g3028 1802 CDD homeodomain 47 102 IPR001356 GO:0003677
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 101 123 - -
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 13 50 - -
Tpr7g3028 1802 Coils Coil 469 504 - -
Tpr7g3028 1802 ProSiteProfiles 'Homeobox' domain profile. 42 102 IPR001356 GO:0003677
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 1 55 - -
Tpr7g3028 1802 PANTHER HOMEOBOX DOMAIN PROTEIN 10 1802 - -
Tpr7g3028 1802 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1141 1213 IPR028941 -
Tpr7g3028 1802 SUPERFAMILY Homeodomain-like 31 101 IPR009057 -
Tpr7g3028 1802 Pfam HB1, ASXL, restriction endonuclease HTH domain 754 822 IPR007759 GO:0006355
Tpr7g3028 1802 Pfam Homeodomain 45 101 IPR001356 GO:0003677
Tpr7g3028 1802 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 966 1006 IPR028942 -
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 422 462 - -
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 852 892 - -
Tpr7g3028 1802 MobiDBLite consensus disorder prediction 1760 1776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3028 Tpr-Chr7 37488686 37498012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3028 38 1726 Homeobox Transcription Factor Family AT1G28420 48.229 0.0 1317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Tpr7g3028 WSD 4.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3028 - - gmx:100777465 2363.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3028 7 37488686 37498012 Tpr7g3028 7 37488686 37498012 ECH
Tpr3g1974 3 17851627 17861896 Tpr7g3028 7 37488686 37498012 PCT