Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3024 ATGCTTCATCATCTATTATTCATGTTCCTCTTTCTCTTCCTCCTCCTCCTTCAACCACCAACCATTACCTCTCTCTCACAAGAAGGTTTCTACCTACACCAATTCAAACTCTCCCTAGACGATCCCTCCTCTTCTTTATCCACCTGGAACAACAACCGTGACCAAACACCATGCACTTGGTCCGGCATAACCTGCGACGACAACAAAACAGTAACAAAAATCAACCTCTCAAATTTCAACCTCTTTGGTCCACTTCCAACTTCAATCCTCTGTCGTTTAACAAATCTCACTACACTAATCCTAACCAACAATTCCATCAACCAAACACTCCCTTTAGATATTTCTCTTTGCACCTCCCTTACTCATTTAGACCTCTCTCAAAATCTACTCACCGGTACACTCCCCCACACTCTATCAAATCTTCCTAACCTCCGTTATCTTGACTTAACGGCTAACAACTTCTCCGGTGAAATACCTAACTCTTTCGGTAAATTCCAGAAACTTGAAGTCATTTCGTTAGTTTATAATCTTCTAGATTCTTCTATTCCTGCTTCTCTCGGAAACGTAACTACATTGAAAACTCTTAATCTCTCTTATAATCCGTTTCAACCGTCGCATATTCCGCCGGAGATCGGAAACCTAACTAACCTTGAGATTCTATGGCTTAGTTCATGTAATCTTGTTGGTGTTATTCCTGATTCGTTTAGGAATTTGAAGAAACTAAGTGTGTTTGATCTTTCTATGAATAATCTTGAAGGTTCTATTCCGAGTTCGCTCACTGAAATGACGAGTTTGAAGCAGATTGAGCTTTATAATAACTCGTTGTCCGGTGAGTTACCTGCCGGAATGTCGAATCTTACTTTGTTGAGGCTTATTGATGTTTCGATGAATTCTATCGGTGGTGTTATTCCTGATGAGTTATGTAGATTACCGCTTGAGAGTCTTAATCTTTATGAGAATCGATTCTCCGGTGAGTTGCCGGCGAGTATAGCTGATTCGCCGAACTTATATGAGTTTAAGATTTTTACGAATTTGCTCACCGGTGAGTTGCCGGAGAATTTAGGGAAGAATGGTCCGTTGATATGGTTTGATGTTTCGAATAATAAATTTTCCGGTAAGATTCCGGCAAGTTTGTGTGAGAAGGGAGCGTTGGAGGAGTTATTGATGATACATAATTCGTTTTCCGGGGAGATTCCGGAGAGTTTGGGTAGGTGTCGAACATTGGCGCGTGTTAGGTTGGGTTTTAATAGGTTGTCTGGTGATGTTCCGGTGGGTTTGTGGGGTCTGCCGCATGTGTATCTTCTTGAACTTGTTGATAACTCGTTTTCTGGTTCAATTGCTAAGACTATTGGTGGAGCTGGAAATTTGTCTTTGTTGACTTTATCCAATAATAATTTTTCTGGTGTGATTCCTGAAGAGATTGGAAGATTGGAAAATCTTTTGGAGTTTTCTGGTGGTAATAACAAGTTCAACTCTTCATTGCCTGAGAGTATTGTGAATCTTTCCCAGCTTGGGATTCTTGATCTTCACAATAATAATCTCTCTGGGGAGCTTCCAAAAGGGATTCAATCTCTTAAGAAACTCAATGAGTTAAATTTGGCTAATAATGAGATTGCTGGTAAAATTCCTCAAGAAATTGGGAGTATGTCTGTGCTAAATTTTCTTGATCTTTCTAATAATCGATTTTCCGGAAATGTTCCTTTGAGTTTGCAGAATTTGAAGCTGAATCAGCTAAATTTGTCTTACAATAGTCTTTCTGGAGAGATTCCACCTCTTATGGCTAAGGATATGTATAGGGATAGTTTTATCGGTAATCCCGGTTTGTGCGGATATTTGAAAGGTTTGTGTGACAAAGGGGAGGGTAAGAGTACAAATTTTGTATGGTTACTTAGAACTATTTTCATAGTTGCAGCTTTGGTTTTAGTCTTTGGTGTGATTTGGTTCTACTTCAAGTACATGAATATCAAGAAAGGTAGATCTATTGATAAAACAAAATGGACATTGATGTCGTTTCATAAACTGGGTTTTGGTGAAGACGAGGTCTTGAATTGCCTTGATGAAGATAATGTCATAGGAAGTGGATCGTCCGGGAAAGTCTACAAGGTTGTGCTTAAAAATGGAGAAGCTGTTGCCGTGAAGAAGATATGGGGCGGGGTCAGAGTGGAAACGGAGGGTGGAGATATTGAAAAGAATCAATTTCAAGACAATGCTTTTGATGCAGAGGTGGAAACTTTGGGAAAGATTAGGCACAAAAACATTGTCAAGCTATGGTGTTGCTGTACCACGAGGGATTGCAAGCTATTGGTTTATGAGTATATGCCAAATGGTAGTCTTGGTGATATGCTTCATAGCAGTAAAGGAGGGTTGTTGGATTGGCCAACTAGGTATAAGATAGCTCTTGATGCTGCAGAAGGCCTATCTTATCTGCATCACGACTGTGTTCCTCCTATTGTTCATAGAGATGTGAAATCTAATAACATCTTGTTGGATGAAGAATTTGGCGCAAGGGTTGCAGATTTTGGGGTAGCTAAGGTGGTCGAATCCAACGGGAAAGGAACTAAATCCATGTCTGTCATAGCTGGCTCTTGTGGGTATATTGCACCAGAATATGCATACACACTCAGAGTGAATGAGAAGAGTGACATATATAGTTTTGGTGTTGTTATCCTTGAGTTAGTCACCGGAAGGAAGCCGGTAGATCCTGAATTTGGGGAAAAAGATTTGGTTATGTGGGCATGTAACACCTTGGATCAGAAAGGTGTTGACCATGTGCTTGACTCACGACTTGATTCATGTTTCAAAGAAGAAATTTGCAAGGTCCTCAACATTGGCCTAATGTGCACTAGTCCTCTTCCAATCAACCGGCCTGCAATGAGAAGAGTAGTGAAGATGTTACTAGAGGTAGGAGGCACGGATAGCCAAACCAAGTCTTCCCAGAAAGCTGGAAAGTTGTCACCATATTACTATGATGATGCATCAGATCATGGAAGTGTTGCTTAA 3000 0.404 MLHHLLFMFLFLFLLLLQPPTITSLSQEGFYLHQFKLSLDDPSSSLSTWNNNRDQTPCTWSGITCDDNKTVTKINLSNFNLFGPLPTSILCRLTNLTTLILTNNSINQTLPLDISLCTSLTHLDLSQNLLTGTLPHTLSNLPNLRYLDLTANNFSGEIPNSFGKFQKLEVISLVYNLLDSSIPASLGNVTTLKTLNLSYNPFQPSHIPPEIGNLTNLEILWLSSCNLVGVIPDSFRNLKKLSVFDLSMNNLEGSIPSSLTEMTSLKQIELYNNSLSGELPAGMSNLTLLRLIDVSMNSIGGVIPDELCRLPLESLNLYENRFSGELPASIADSPNLYEFKIFTNLLTGELPENLGKNGPLIWFDVSNNKFSGKIPASLCEKGALEELLMIHNSFSGEIPESLGRCRTLARVRLGFNRLSGDVPVGLWGLPHVYLLELVDNSFSGSIAKTIGGAGNLSLLTLSNNNFSGVIPEEIGRLENLLEFSGGNNKFNSSLPESIVNLSQLGILDLHNNNLSGELPKGIQSLKKLNELNLANNEIAGKIPQEIGSMSVLNFLDLSNNRFSGNVPLSLQNLKLNQLNLSYNSLSGEIPPLMAKDMYRDSFIGNPGLCGYLKGLCDKGEGKSTNFVWLLRTIFIVAALVLVFGVIWFYFKYMNIKKGRSIDKTKWTLMSFHKLGFGEDEVLNCLDEDNVIGSGSSGKVYKVVLKNGEAVAVKKIWGGVRVETEGGDIEKNQFQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDMLHSSKGGLLDWPTRYKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDEEFGARVADFGVAKVVESNGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRKPVDPEFGEKDLVMWACNTLDQKGVDHVLDSRLDSCFKEEICKVLNIGLMCTSPLPINRPAMRRVVKMLLEVGGTDSQTKSSQKAGKLSPYYYDDASDHGSVA* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3024 999 SUPERFAMILY L domain-like 346 609 - -
Tpr7g3024 999 SUPERFAMILY RNI-like 73 422 - -
Tpr7g3024 999 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Tpr7g3024 999 PANTHER LRR RECEPTOR-LIKE KINASE 6 978 - -
Tpr7g3024 999 Pfam Protein kinase domain 687 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3024 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Tpr7g3024 999 Gene3D Phosphorylase Kinase; domain 1 670 772 - -
Tpr7g3024 999 ProSiteProfiles Protein kinase domain profile. 685 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3024 999 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524
Tpr7g3024 999 Gene3D Ribonuclease Inhibitor 191 262 IPR032675 -
Tpr7g3024 999 Gene3D Ribonuclease Inhibitor 263 333 IPR032675 -
Tpr7g3024 999 SMART serkin_6 685 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3024 999 Pfam Leucine rich repeat 94 154 IPR001611 GO:0005515
Tpr7g3024 999 Pfam Leucine rich repeat 216 275 IPR001611 GO:0005515
Tpr7g3024 999 Gene3D Ribonuclease Inhibitor 334 619 IPR032675 -
Tpr7g3024 999 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 978 - -
Tpr7g3024 999 SUPERFAMILY Protein kinase-like (PK-like) 681 965 IPR011009 -
Tpr7g3024 999 Gene3D Transferase(Phosphotransferase) domain 1 773 989 - -
Tpr7g3024 999 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Tpr7g3024 999 SMART LRR_typ_2 525 549 IPR003591 -
Tpr7g3024 999 SMART LRR_typ_2 501 524 IPR003591 -
Tpr7g3024 999 SMART LRR_typ_2 214 237 IPR003591 -
Tpr7g3024 999 SMART LRR_typ_2 141 164 IPR003591 -
Tpr7g3024 999 SMART LRR_typ_2 286 310 IPR003591 -
Tpr7g3024 999 SMART LRR_typ_2 189 213 IPR003591 -
Tpr7g3024 999 SMART LRR_typ_2 118 140 IPR003591 -
Tpr7g3024 999 SMART LRR_typ_2 93 117 IPR003591 -
Tpr7g3024 999 SMART LRR_typ_2 238 262 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3024 Tpr-Chr7 37453585 37458818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3024 20 999 Receptor kinase-like Gene Family AT1G28440 68.826 0.0 1385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr7g3024 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3024 - - gmx:100776936 1490.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3024 7 37453585 37458818 Tpr7g3024 7 37453585 37458818 ECH
Tpr7g3024 7 37453585 37458818 Tpr3g1984 3 17996615 18032278 ECH