Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3016 ATGGGGTTAATCGATCTCAACACTACTGAGGAAGATGAAACTCCTTATTCAGCTATTTCTTCTTCCTCTTCTTCTTCTCACTCTGGTATAAGTACTTCTGCTTCAGCTATGGCTGTTCCTCTTCAAACTTCTGTTTGTTTGGAACTATGGCATGCTTGTGCTGGTCCTTTGATCTCTTTACCAAAGAAAGGAAGCATTGTTGTTTATGTTCCACAGGGTCACTTTGAACAAGCTCATGATTTTCCTGTTTCTGCTTGTAATATTCCACCTCATGTTTTCTGTCGTGTTCTTGATGTTAAGCTTCATGCAGAGGAAGGGAGTGATGAAGTGTATTGTCAAGTCTTGTTGGTTCCTGAAAATCAGCAAGTGGAGCAAAATGTTCGGGAAGGGGTAATCGATGTTGAGGCGGAAGAGGAGGATGCTGAAGCTATTGTGAAGTCAACAACACCTCATATGTTCTGCAAGACTCTCACAGCTTCTGACACTAGCACTCATGGAGGATTCTCAGTGCCTCGTCGAGCAGCCGAAGATTGCTTTCCTCCCCTGGATTACAGCCAGCAGAGACCTTCACAAGAACTTGTAGCTAAGGATCTCCATGGCTTGGAGTGGAGGTTCCGTCACATATATAGGGGGCAGCCAAGGAGGCATTTGCTGACAACCGGGTGGAGTGCATTTGTGAACAAGAAGAAGCTTGTGTCTGGCGATGCTGTGTTGTTTCTTAGGGGTGATGATGGAGAACTGAGACTAGGGATTCGAAGGGCGGTGCAGTTGAAAAGTTCTGGTTCCTTTGCAGCTCCTTCTGGTATGCAGTTGGATCCTGGCTCTCTCATGGATGTCGTGAATGCTTTATCTAAAAGAACTGCCTTCAGCGTTTGCTATAATCCAAGGGTCAGTTCTTCGGAATTCATCATACCTGTCAACAAATTCATGAAGAGCCTTGATTGTTCTTATTCTGTTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGATTCTGCAGAACGAAGATTTACTGGATTAATTGCTGGAATAAATGATGTGGATCCTGTTCGATGGCCAGGATCAAAATGGAAATGCCTGTTGGTAAGGTGGGATGACATAGAAGCATCAAGGCATAATAGGGTTTCCCCTTGGGAAATTGAGCCATCTGGTTCTGCTTCTGCTTCCAGCAACCTCATGGCGGCTAGTTTGAAGAGGACCAGGATTGGAATCACTTCAGGGAAGCTAGAATTTCCAGTTCCTAATGGAATTGGAGCGTCAGACTTTGGGGAATCTTTGAGGTTCCAAAAGGTCTTGCAAGGTCAAGAAATTATGGGCATTAATACTCCCTATGACAGTATTAATGCTCAGAGTCCCCGGTTATATGAGCTAGGGAGATGCTATCCTGGTTCAAACTGTTCCGGGATTGCTGCAACAGGAAATATCAGAATGGCGCAAGCAACTTCTGATTTCCCAGGTAACAGCACAGGCTTTAGTGAATCCTTCCGATTCCAAAAGGTCTTGCAAGGTCAAGAAATTCTTCCATGTCCACCCTACGGTCGAGCCTCATTTGACGAGACCCGTGGAAATGGTTGCTTTGGACGTTATGATGGTTATCAACTTCTCGGCTCCAGAAATGGATGGCCTGCACAGATGCATGACAATTCTTCACATTTGCATGCATCTGTCACAGCTGGACAAGTTTCATCTCCATCATCTGTGTTGATGTTCCAGCATGCTGTTAATCCAGTTTCAAACTCTCGTTATGATATTGGTAATCGCAATCAGGGTTCATACATAACTGAAGCGAAAAGTGGAATGTTTGTGCCTACCATATCCGACAAACCTATCTTCTCTAGTGGACTAGCTCAAGAAGGCATGAATTCTTTCGGTACCAATAATTTTCTTAATAATACTCAGTTTGACAGTTCAAGGTCTCGTGATTCGGTGTCAACATTGAGAGGCAATCAAGATATGGTTTCGTCATGTAAAACTGGCTGCAGACTCTTTGGATTTTCATTAACTGACGACACACATGTTGGAAATAAAGAGGCTGCTGTTGCCTCTACCATCACTTCTCGATTCAATAAGGACTATGGTGGCGGTTGA 2088 0.4416 MGLIDLNTTEEDETPYSAISSSSSSSHSGISTSASAMAVPLQTSVCLELWHACAGPLISLPKKGSIVVYVPQGHFEQAHDFPVSACNIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPENQQVEQNVREGVIDVEAEEEDAEAIVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAVQLKSSGSFAAPSGMQLDPGSLMDVVNALSKRTAFSVCYNPRVSSSEFIIPVNKFMKSLDCSYSVGMRFRMRFETEDSAERRFTGLIAGINDVDPVRWPGSKWKCLLVRWDDIEASRHNRVSPWEIEPSGSASASSNLMAASLKRTRIGITSGKLEFPVPNGIGASDFGESLRFQKVLQGQEIMGINTPYDSINAQSPRLYELGRCYPGSNCSGIAATGNIRMAQATSDFPGNSTGFSESFRFQKVLQGQEILPCPPYGRASFDETRGNGCFGRYDGYQLLGSRNGWPAQMHDNSSHLHASVTAGQVSSPSSVLMFQHAVNPVSNSRYDIGNRNQGSYITEAKSGMFVPTISDKPIFSSGLAQEGMNSFGTNNFLNNTQFDSSRSRDSVSTLRGNQDMVSSCKTGCRLFGFSLTDDTHVGNKEAAVASTITSRFNKDYGGG* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3016 695 MobiDBLite consensus disorder prediction 10 26 - -
Tpr7g3016 695 Pfam B3 DNA binding domain 153 254 IPR003340 GO:0003677
Tpr7g3016 695 Pfam Auxin response factor 280 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Tpr7g3016 695 CDD B3_DNA 151 253 IPR003340 GO:0003677
Tpr7g3016 695 ProSiteProfiles B3 DNA-binding domain profile. 153 255 IPR003340 GO:0003677
Tpr7g3016 695 MobiDBLite consensus disorder prediction 1 26 - -
Tpr7g3016 695 Gene3D - 151 255 IPR015300 -
Tpr7g3016 695 SMART B3_2 153 255 IPR003340 GO:0003677
Tpr7g3016 695 Gene3D - 316 390 - -
Tpr7g3016 695 PANTHER AUXIN RESPONSE FACTOR 37 685 - -
Tpr7g3016 695 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 37 685 IPR044835 GO:0003677|GO:0006355|GO:0009725
Tpr7g3016 695 SUPERFAMILY DNA-binding pseudobarrel domain 146 260 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3016 Tpr-Chr7 37370081 37375474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3016 152 509 B3 DNA Binding Superfamily AT2G33860 59.557 5.34e-145 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Tpr7g3016 B3 3.1e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3016 K14486 - gmx:100789906 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3016 7 37370081 37375474 Tpr7g3016 7 37370081 37375474 ECH