Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3004 ATGGAACAGCATCATAGAGTGTTTCCTCTTCTGGTGCTTCTTCTTTTCCTAGTTGTGATTGTTGCATCACAGACAGATAATGGAGATTTTACTGCTCTTTCATCTTTGGTACAATCATGGAAAAACAAACCATTAAATTGGGTTGGTAATGATCCTTGTGGAAGTGGTTGGGATGGAATTCGTTGCACCAATTCAAGAATTACCGAATTGAGACTAGCTGGCTTGAGTTTGGAGGGTCAGCTATCTTCAGCAATCCAGTCCTTATCTGAACTTAAAACGCTGGATCTTTCATACAACACTGGCATGACAGGAACAATTCCACGAGAAATTGGAAATTTGAAAAACCTTGATTCCTTGGCATTGGTTAATTGCGGTTTCTCTGGCCCTATTCCAGATACAATAGGATCTTTGAAGAAGCTGACATTTTTGGCACTGAATTCGAACAAGTTCAATGGAAATATTCCGCGCTCTCTTGGCAATCTAGCCAACCTTGATTGGTTAGATCTTGATGATAACGAACTGGATGGGCCTATTCCTGTCTCTAATGATCAAGGACAATCGGGTTTGGACATGCTCCTTAAGGCGCATCACTTTCATTTGGGGAACAATAAACTCTCAGGTCCAATACCATCACAACTTTTTAGCTCCAGCATGATACTAAAACATGTGCTTTTCGACCACAATCAACTAACCGGCAGTATCCCTAGCACCCTTAGCAGCCTTGTGAGCACAGTGGAAGTGGTGCGCCTTGACAATAATCAATTAAGCGGTACAGTACCTTCCAGCTTGAACAATCTCGAAATACTTAGCGAGATGTATTTATCTCACAATAAACTGAGCGGCTCTCTGCCGGATCTTACTGGAATGAATAAGCTCACCTACGTGGATATGAGCGACAATAGCTTCAACTCTACTGATATTCCTTCATGGGTTACTAGTCTGAAAGATCTGACGACAGTAATACTGAAGGACAACCAGCTCAGTGGCACATTAAATCTCAGCAATGGCTTTACAAAAACTCTGCAACTTATTGATTTGCAGAATAATGACCTGACCGTCCTCGAGTTGGGAAGCCAAGAATTGGACTTTGACTTGAGACTGGCTCAAAACAGAATTTGTCTTGAAAATGGAGTTTCTGATAAGAGTTACTGCAAAGTTCCCCAAGCCATTCCCTCATATTCAACACTGCCAAATGGTTGCTCGCCTCCTTCGTGCAGTAACAATCAGATTGCCAGCCCTAACTGTAAATGTGCATTTCCCTATATTGGAAATCTATCATCCAGAGCTTTTAGTGTCTCAAACTATAGTGACACAAGTTACTACAAGGATATTGAGAAAACTCTGTTGGATACTTTCCGAAAACAAAATATTCCGGTGGATTCAGTTTCTCTTAGTAATCCTATCAAGGTTTCAGCTACTGAAAATTTTCAGTTAACTCTTAGTGTCTTCCCATCTCAAACCGATCGTTTCAATACAACTGGAGTTTCAACTGCTGCTTTTGTTCTTAGCAACCAAATTTACACGCCTCCAGATTATTTCACCCCTTACATCTTCATTGGCAGTAGCTATCAACATTATGGAGGAGAACCTAAAGGATCAAAGTCATCACATACCGGGGCTATAATTGGTGCCGTAGTTGCTGTATTGGTCTTTATAGTACTGGCAATCCTCATAGGGTTATACGTCATTGGCAAAAAAAGAAGAGCAGGATCTTCCGAGTTGAACCCTTTTGTAAACTGGGAACAAAACAAGAATAGTGGAGCTGCTCCTCAGCTGAAAGGAGCGCGATGGTTTTCATTTGATGACATGAGGAAATACACCAACAATTTCGCTGAAGCCAACACTATCGGATCAGGAGGCTATGGACAGGTTTACCAAGGTGCTCTTCCCAATGGGGAATTGGTTGCAATCAAAAGGGCTGGAAAAGAATCTATGCAGGGAGCTGTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAAAATCTCGTTAGTCTTGTCGGCTTCTGTTACGAGAAAGGTGAACAAATGTTGGTCTATGAGTACGTTCCAAACGGCACTTTAATGGATAGTCTTTCAGGAAAATCTGGGATATGGATGGATTGGATAAGGAGGCTCAAAGTTACATTGGGTGCTGCCAGGGGTCTGACCTATCTACATGAACTTGCTGACCCACCAATCATACACAGAGACATAAAATCAAGCAACATCCTACTTGATAATCACCTCGTCGCAAAAGTTGCTGATTTTGGTCTCTCGAAACTTCTTACTGATAGCGATAGGGGCCATGTTACTACTCAAGTCAAAGGAACAATGGGATACTTGGATCCTGAATATTACATGACACAACAATTGACAGAAAAGAGTGATGTATATAGCTTTGGAGTGCTAATGCTGGAACTAGCAACATCAAGAAAGCCAATAGAGCAAGGAAAATATATTGTAAGAGAGGTAATGAAGGTAATGGATACATCAAAAGAGTTATACAACCTTCATTCCATTCTTGATCAAAGTCTACTCAAAGCGTCGAGACCAATAGGTTTAGAAAGGTATGTAGAGCTGGCATTGAGGTGTGTCAAAGAATATGCAGCTGAGAGACCTTCAATGGCCGAGGTTGCAAAAGAGATCGAAAGCATAATCGAGCTTGTTGGAGTGAATCCGGATTCGGAATCAGCTCCAACAACAGAAACTTATGTGGATGCTGGTGTAGGGGATGGTAAACATCCTTATGTGAATGATGATGAGTTTGAATATAGTGGAATGTTTCCAACAATAAGGGTAGATCCTCAATGA 2802 0.4126 MEQHHRVFPLLVLLLFLVVIVASQTDNGDFTALSSLVQSWKNKPLNWVGNDPCGSGWDGIRCTNSRITELRLAGLSLEGQLSSAIQSLSELKTLDLSYNTGMTGTIPREIGNLKNLDSLALVNCGFSGPIPDTIGSLKKLTFLALNSNKFNGNIPRSLGNLANLDWLDLDDNELDGPIPVSNDQGQSGLDMLLKAHHFHLGNNKLSGPIPSQLFSSSMILKHVLFDHNQLTGSIPSTLSSLVSTVEVVRLDNNQLSGTVPSSLNNLEILSEMYLSHNKLSGSLPDLTGMNKLTYVDMSDNSFNSTDIPSWVTSLKDLTTVILKDNQLSGTLNLSNGFTKTLQLIDLQNNDLTVLELGSQELDFDLRLAQNRICLENGVSDKSYCKVPQAIPSYSTLPNGCSPPSCSNNQIASPNCKCAFPYIGNLSSRAFSVSNYSDTSYYKDIEKTLLDTFRKQNIPVDSVSLSNPIKVSATENFQLTLSVFPSQTDRFNTTGVSTAAFVLSNQIYTPPDYFTPYIFIGSSYQHYGGEPKGSKSSHTGAIIGAVVAVLVFIVLAILIGLYVIGKKRRAGSSELNPFVNWEQNKNSGAAPQLKGARWFSFDDMRKYTNNFAEANTIGSGGYGQVYQGALPNGELVAIKRAGKESMQGAVEFKTEIELLSRVHHKNLVSLVGFCYEKGEQMLVYEYVPNGTLMDSLSGKSGIWMDWIRRLKVTLGAARGLTYLHELADPPIIHRDIKSSNILLDNHLVAKVADFGLSKLLTDSDRGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELATSRKPIEQGKYIVREVMKVMDTSKELYNLHSILDQSLLKASRPIGLERYVELALRCVKEYAAERPSMAEVAKEIESIIELVGVNPDSESAPTTETYVDAGVGDGKHPYVNDDEFEYSGMFPTIRVDPQ* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3004 933 SUPERFAMILY Protein kinase-like (PK-like) 596 892 IPR011009 -
Tpr7g3004 933 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 2 915 - -
Tpr7g3004 933 Pfam Leucine rich repeat 244 301 IPR001611 GO:0005515
Tpr7g3004 933 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Tpr7g3004 933 ProSitePatterns Protein kinases ATP-binding region signature. 616 642 IPR017441 GO:0005524
Tpr7g3004 933 SUPERFAMILY L domain-like 45 356 - -
Tpr7g3004 933 Gene3D Ribonuclease Inhibitor 186 427 IPR032675 -
Tpr7g3004 933 Pfam Protein kinase domain 612 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3004 933 Gene3D Phosphorylase Kinase; domain 1 580 685 - -
Tpr7g3004 933 Gene3D Transferase(Phosphotransferase) domain 1 686 894 - -
Tpr7g3004 933 ProSiteProfiles Protein kinase domain profile. 610 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g3004 933 PANTHER RECEPTOR-LIKE PROTEIN 55 2 915 - -
Tpr7g3004 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Tpr7g3004 933 CDD STKc_IRAK 616 882 - -
Tpr7g3004 933 SMART serkin_6 610 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3004 Tpr-Chr7 37281983 37288630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3004 10 933 Receptor kinase-like Gene Family AT5G49760 50.578 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Tpr7g3004 Pkinase 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3004 - - mtr:MTR_2g014960 1526.92