Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2999 ATGGTTTCATTTGCACAATCCCAACCAGAATTACCCTTAAACGAAAATGACTCACAAGACATGGTAATATACCAAGTCCTAAACGAAGCCAACAATCTAACCAACACATTTATGCAACAAAGGAACCACCATCAAGCTCTGAGTGGCTTAGAACCTACAAGGGCTATCACCAAGAAGCATTATAGAGGTGTAAGGCGTCGTCCGTGGGGTAAATATGCGGCGGAGATTCGTGACTCGGCTCGTCATGGAGCTAGAGTATGGCTTGGAACTTTTCAAACAGCTGAAGAAGCTGCTATGGCTTATGATAGAGCTGCTTTCAAAATGAGAGGTTCAAAAGCTTTGCTTAATTTTCCAGCTGAAATTGTTGCTGCAGCAGCTTCTATGCAAATGGAATTTTCAAATTCTAAGCTCAAGTTGAATAATAGTAATCATGATTCTGAATCAAGTGGTAGCAGCTGTTGTACCAATTCTAATTCCAAGGAGCAAGTAAAGAAAGAAAAAGATTAA 507 0.4024 MVSFAQSQPELPLNENDSQDMVIYQVLNEANNLTNTFMQQRNHHQALSGLEPTRAITKKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFQTAEEAAMAYDRAAFKMRGSKALLNFPAEIVAAAASMQMEFSNSKLKLNNSNHDSESSGSSCCTNSNSKEQVKKEKD* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2999 168 MobiDBLite consensus disorder prediction 139 159 - -
Tpr7g2999 168 ProSiteProfiles AP2/ERF domain profile. 60 118 IPR001471 GO:0003700|GO:0006355
Tpr7g2999 168 PANTHER DNA-BINDING DOMAIN 6 137 IPR044808 GO:0003700|GO:0009873
Tpr7g2999 168 CDD AP2 59 119 IPR001471 GO:0003700|GO:0006355
Tpr7g2999 168 MobiDBLite consensus disorder prediction 139 168 - -
Tpr7g2999 168 SUPERFAMILY DNA-binding domain 60 120 IPR016177 GO:0003677
Tpr7g2999 168 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Tpr7g2999 168 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Tpr7g2999 168 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5 6 137 - -
Tpr7g2999 168 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Tpr7g2999 168 Gene3D AP2/ERF domain 59 120 IPR036955 GO:0003700|GO:0006355
Tpr7g2999 168 SMART rav1_2 60 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2999 Tpr-Chr7 37245555 37246512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2999 4 121 AP2-EREBP Transcription Factor Family AT4G17500 46.897 1.44e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g2999 AP2 2.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2999 K13433 - gmx:100811533 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2999 7 37245555 37246512 Tpr7g2999 7 37245555 37246512 ECH