Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2998 ATGGAGAATATTCACATTCATAATAGTACAAATCTGACAAATTCACCTTCGCCGTCAAAACATTCTCATCTGAGCACTCAGTTCAATAATCATGATGCAACTTCCGAAGGGTCAATTCTTGAGAATGTATGGGCTAAGATTATAAGCAATAATGATAGAAGAACAAATGAAAATGAATGTTCTAACACATGGGAAGATTTGCCTACTCTTGACGAAAGAGACGGTTCGATGGAAATTCTTCAAAGATTGCCAAGTTTAGGAAGATGGATATCAATGGGAGCTGAATTTTGGGAACAAGTTTTAGATAGTACTATTCTACCTACTACTAGTACTTCAATAAGCAATATAGAAGATTATATCAATAGCAACAAAAATAATGAAATTGAAAGTGTTGATAAGTCAAAGAAAAAAGTGGAAGGTGGTTTGAGAAAAGAGAAAAAAACAGATGAAAAACATTATAGAGGTGTAAGGAGAAGACCATGGGGAAAATATGCAGCTGAGATAAGAGATTCGTCGAAGAAAGGCGCAAGAGTTTGGCTTGGTACATTTGATACAGGTGAAGAAGCTGCTTTAGCTTATGATAAAGCTGCTTTGAGAATTAGAGGTTCAAAAGCATGTCTAAATTTTCCAATTGAGAAAGTTACAAACACAAATGCAAATACAAAGAGAGAAAGTTTATTGGATTCTAAGAAGAGAGGATTAAGGGAAAGAGGAGAATTTGTTGAAGAACCTGCAACAAAAAAGATGGCAGGGTTGGAAGATATGTTAGAAAATGATGTTTTTGTATTTCAGGACTTAGGAATTGATTATTTGGACAGTTTATTGTCTTCTTTTTAA 837 0.3405 MENIHIHNSTNLTNSPSPSKHSHLSTQFNNHDATSEGSILENVWAKIISNNDRRTNENECSNTWEDLPTLDERDGSMEILQRLPSLGRWISMGAEFWEQVLDSTILPTTSTSISNIEDYINSNKNNEIESVDKSKKKVEGGLRKEKKTDEKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTGEEAALAYDKAALRIRGSKACLNFPIEKVTNTNANTKRESLLDSKKRGLRERGEFVEEPATKKMAGLEDMLENDVFVFQDLGIDYLDSLLSSF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2998 278 ProSiteProfiles AP2/ERF domain profile. 152 210 IPR001471 GO:0003700|GO:0006355
Tpr7g2998 278 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 41 278 - -
Tpr7g2998 278 Gene3D AP2/ERF domain 151 212 IPR036955 GO:0003700|GO:0006355
Tpr7g2998 278 CDD AP2 151 211 IPR001471 GO:0003700|GO:0006355
Tpr7g2998 278 MobiDBLite consensus disorder prediction 1 32 - -
Tpr7g2998 278 Pfam AP2 domain 152 202 IPR001471 GO:0003700|GO:0006355
Tpr7g2998 278 SMART rav1_2 152 216 IPR001471 GO:0003700|GO:0006355
Tpr7g2998 278 SUPERFAMILY DNA-binding domain 152 211 IPR016177 GO:0003677
Tpr7g2998 278 PRINTS Ethylene responsive element binding protein signature 153 164 IPR001471 GO:0003700|GO:0006355
Tpr7g2998 278 PRINTS Ethylene responsive element binding protein signature 176 192 IPR001471 GO:0003700|GO:0006355
Tpr7g2998 278 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 41 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2998 Tpr-Chr7 37243385 37244546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2998 36 278 AP2-EREBP Transcription Factor Family AT4G18450 35.962 7.40e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g2998 AP2 4.3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2998 - - var:108341685 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2998 7 37243385 37244546 Tpr7g2998 7 37243385 37244546 ECH