Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2996 ATGCATTACCTTTCAACTATTCCTCAAGTACTTACAAGAATTTGTCTATTATTTTTCTTACTCATACCTTTTGTTATCACTCACGGTATCCGAGACGAGACCATGAATTCAGACAAATATGTTATATCCATTGGTGTGATCATTGACGGTGATTCTCGTATTGGGAAAGAACAAGAAGTAGCCATGGACATTGCAGCCAAGAATTACAACAACACTTCAAAGAACCACAAGCTGGCTCTCTATTTTCAGAACTCCACCGAGGATACCCTCAGAGCCATCACACTTGCTGAAGAGATGATTAATGTGCAAAAGGTGCAAGTGATTATAGGGATGCACACATGGCCAGAAGCAGCTATAGTGGCTGAAATAGGAAGCAAATCTCAAGTTCCTATCATATCCTTTGCTGCACCTATCATAACGCCACCATTGATGAAAGCTCGATGGCCTTTTCTAGTGAGGCTAGCTAACAATGGTACAGCATATATAAATTGTATTGCAGAAATAGTGCAGGCTAAAAGCTGGAAGAGAGTAGTAGTAATCTACGAAGATGACGGATACGGTGGAGATTATGGGATCCTATCCCTACTAGATGAGGCCCTTCAGGATGTGGATTCATTGATAGAGCGCCGCTTAGCCCTTCCTCCAATTTCTTCTCTACATGATCCAGGAGAGCTTGTTTTTGAAGAGATGCTTAAGTTAAAACAAACACAATCTCGGGTTTTCATAGTGCTGCAATTATCATTAGAAATGGCAATTCATGTGTTCAAAGAAGCTTCAAAAGTTGGATTGGTGGATACAGAATCAGTTTGGATAATCCCAGAGAGCATAACTAATTTGCTGGACACTGTCAATAAGTCTGCTATTTCCTATATGGAAGGAGCTTTAGGAATTAAAAACTACTACTCAGAAAGAAGCAAGGAGTATCAAGAATTTGAGGCTCAGTTCCGGAAAACATTTTCGTCAAAGAATCCAGAAGAAGATAACCGATACCCCGGATTTTATGCTCTACAAGCATATGATAGCATTAACATTGTAACTCAAGCAATCAACAGAATGACCGGTATGAACAATAGTAGCTCAAAGACTTTACTAAGAGAAATACTTTCTAGCAATTTCCTTGGTTTAAGTGGTCATATTCAACTTGAAGCCGGACAACTTATGCAGAAGAATCGTGTCTTAAGAATTGTAAATGTGGCTGGGAAGAGTTACAAGGAGTTATGTTCTTGGACTCAACAACGCGGATTCACCACAATACTCCATGCCGGACAAAGTGGAAATAAGGTTGCTGGAAGTACAGAATGTTTCAGGGGTGTACGGTGGCCTGGAAATTTGGACCGCGATCCAAAGGGATGGAACATGCCTACCATAACAAATCCATTGAAAATTGCAGTTAGAAGTAGAACCTCCTTTTCCAGATTTGTCAAAGTTGAGTATGGACAGAATCAAAAGCCTTATAAATATAGTGGATTCTGCATTGAAATTTTTGAGCATGTACATAAACTCTTGGGATACGATCTTCCATATAAATATTTTCCCATCGATGGAACCTATAACGATTTGGTTCAGCTTGTCTATAACAAGACTTACGACGCAGTTGTTGGGGACATGACCATAATAGAGGAAAGATTGCAGTATGTGGATTTTACAGTACCATATGCAGAATCAGGATTGTCAATGATAGTTCCAATGAAAACTGAAGAATCAGCATGGATGTTTATGAAGCCATTTACCTGGGAATTGTGGTTGGTTACATGTGCAATCTTGATTTACACAATGTTAGTTGTTTGGTATCTCGAGCGAGAACCTAACCCCGAGTTTCATGGAAACTGGAAGCTCCAACTCAGCACAGCTCTTTGGTTTACCTTCTCCTCTCTATTCTTTGCTCATAGAGAAAAAATGCATAGCAACTTAACTCGATTGGTGATGGTCTCGTGGCTATTTCTTGTATTGATTCTAACCTCAAGCTACACAGCTAGTCTTTCTTCAATGCTTACAGTTAAACAGTTACGACCAAATGTCACGGACATTCAGTGGCTGAAGAACAATAACAAGAAAATTGGCTGTGACGGCGACTCATTTGTTAGGACGTTCTTAGAGAAAGTTGAAAATTTCAAGCCAGAGAATATCATAAACATTACCGATGAATACAAGTACGATGAAGCATTCGCTAATAACAGCATAACAGCTGCATTTTTTGAGCTCCCGTACGAAAAAGTATTCATCAGTGAATACTGCAAGAGATACACTGGTTTCACTCCCAGAAATAGATTTGGAGGATTAGGCTTTATGTTCCAGAAAGGCTCTCCACTGGCCAGAGATGTTTCGAAAGCTATATTACGTCTCTCGGAAAATGCAGAACTGAAGAGATTGGAAGAAAAATGGTTAATTAACTCACAAGATTGCTCCAACAACGTGACATCCTCCAACGATACGGAGAGTTTGGATCTTGGAAGCTTATGGATTCTATATGTCATCTCTTGTGCCACTTCTACTATTTGTCTGCTAATATCAATCATCAAGCGTCTGAAATCCAATCACCGACGTGAAAACTTGCCACCAGAAGAAGGCAATGGCACACCAAGTGATGAAAGAGTGTGGAACAAGGTTCTTATATTTGCAAAGCAGATTTATATCAAAAAGCTCGATAATTCGAGCAAGGAACAGGATGTAACCGACTGTTCTTCGAGATCAGGTCATGTGAGCATCGCTGATAGCCCCGAACATTCACAAGAATTCGCTTCTCCGCCAAAAGAGGTACATATGACAAGTTCAAGTGTACAACACATGACATAG 2793 0.3992 MHYLSTIPQVLTRICLLFFLLIPFVITHGIRDETMNSDKYVISIGVIIDGDSRIGKEQEVAMDIAAKNYNNTSKNHKLALYFQNSTEDTLRAITLAEEMINVQKVQVIIGMHTWPEAAIVAEIGSKSQVPIISFAAPIITPPLMKARWPFLVRLANNGTAYINCIAEIVQAKSWKRVVVIYEDDGYGGDYGILSLLDEALQDVDSLIERRLALPPISSLHDPGELVFEEMLKLKQTQSRVFIVLQLSLEMAIHVFKEASKVGLVDTESVWIIPESITNLLDTVNKSAISYMEGALGIKNYYSERSKEYQEFEAQFRKTFSSKNPEEDNRYPGFYALQAYDSINIVTQAINRMTGMNNSSSKTLLREILSSNFLGLSGHIQLEAGQLMQKNRVLRIVNVAGKSYKELCSWTQQRGFTTILHAGQSGNKVAGSTECFRGVRWPGNLDRDPKGWNMPTITNPLKIAVRSRTSFSRFVKVEYGQNQKPYKYSGFCIEIFEHVHKLLGYDLPYKYFPIDGTYNDLVQLVYNKTYDAVVGDMTIIEERLQYVDFTVPYAESGLSMIVPMKTEESAWMFMKPFTWELWLVTCAILIYTMLVVWYLEREPNPEFHGNWKLQLSTALWFTFSSLFFAHREKMHSNLTRLVMVSWLFLVLILTSSYTASLSSMLTVKQLRPNVTDIQWLKNNNKKIGCDGDSFVRTFLEKVENFKPENIINITDEYKYDEAFANNSITAAFFELPYEKVFISEYCKRYTGFTPRNRFGGLGFMFQKGSPLARDVSKAILRLSENAELKRLEEKWLINSQDCSNNVTSSNDTESLDLGSLWILYVISCATSTICLLISIIKRLKSNHRRENLPPEEGNGTPSDERVWNKVLIFAKQIYIKKLDNSSKEQDVTDCSSRSGHVSIADSPEHSQEFASPPKEVHMTSSSVQHMT* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2996 930 CDD GluR_Plant 458 795 - -
Tpr7g2996 930 Gene3D - 462 568 - -
Tpr7g2996 930 SUPERFAMILY Periplasmic binding protein-like II 447 796 - -
Tpr7g2996 930 Gene3D - 569 704 - -
Tpr7g2996 930 Pfam Receptor family ligand binding region 59 387 IPR001828 -
Tpr7g2996 930 PANTHER GLUTAMATE RECEPTOR 3.4 22 913 - -
Tpr7g2996 930 SMART GluR_14 459 797 IPR001320 GO:0015276|GO:0016020
Tpr7g2996 930 Gene3D - 705 803 - -
Tpr7g2996 930 Gene3D - 37 163 - -
Tpr7g2996 930 CDD PBP1_GABAb_receptor_plant 43 419 IPR044440 -
Tpr7g2996 930 Pfam Ligand-gated ion channel 796 828 IPR001320 GO:0015276|GO:0016020
Tpr7g2996 930 SUPERFAMILY Periplasmic binding protein-like I 41 451 IPR028082 -
Tpr7g2996 930 MobiDBLite consensus disorder prediction 916 930 - -
Tpr7g2996 930 PIRSF IGluLR_plant 9 929 IPR017103 -
Tpr7g2996 930 MobiDBLite consensus disorder prediction 888 930 - -
Tpr7g2996 930 MobiDBLite consensus disorder prediction 894 908 - -
Tpr7g2996 930 Pfam Bacterial extracellular solute-binding proteins, family 3 485 795 IPR001638 -
Tpr7g2996 930 Gene3D - 164 337 - -
Tpr7g2996 930 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 22 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2996 Tpr-Chr7 37220614 37224570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2996 8 838 Ion Channels AT2G29120 33.217 9.85e-147 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2996 - - mtr:MTR_2g015270 1540.01