Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2994 ATGAATTTTTTTGCTCAAACTTCAAACTCAGTTCCGAATAGTTTGCTTTGGCTTACTCTAATAATCTCACTTTTCCTTTTCCAATGTGTTGCCGATAGTTCTCAAACTACAAGTGTTGGTGTTATCATTGATGTTAATTCTGAAACAGGTAAACAACAGATAAAAGCCATGCAACTTGCAGCTCAAAGATTCAATAATTATTCAAACAATCAAAACATAATCCTTTTCTTCCGTGACTCTGCTAGAAACTCTTTACAAGCAGCTTCAGCTGCTGAAGAATTAATTACTAAAGAGGAAGTCAAAGTGATTATTGGTATGGAAACATGGCAAGAAGCAGCTCTGGTTGCTGACCTTGGAGCCAAGTTTCAAATACCAACAATTTCATTTTCTTCTCCTCCATTATTAGTCTCTTCATCATCAACGCAACTTCGTTGGCCTTTCCTGATTCAAATGGCACAAAATCATTCCATACAAATGAACTATATAGCTGATACTGTCCATGCTTTAAACTCTCAGAAGGTTATAGTTATATATGAAGACAACCCTTATAGTAGCGATTTTGGAATGTTAAGCCTCTTATCTGAGGCACTCGAAAAGGCTAACTCGAAGATTGAGTATCAATTAGTTCTTCCACCATTCAATTTTTTATCTGATCCAAAATGGTTTGTTCTCGACGAATTGTTGAAGTTGTTTCCGTTAAAATCTCGTGTTTTTATTGTACTTCAAGCATCGTTACCTATGGTGAATCATTTGTTTAGAGAAGCTAAGAAAATTGGATTATTGGAGAAAGATTCATCTTGGATAATCAATGAAGAGATTACAAGCATGTTGGATTGTATAGATAAATCTGTTTTATCTTCTATGGAAGGTGTTTTGGGAATCAAAGTCAACTATTCTACAAGCTCTAGTGCTTATACTCAATTGTGTGAAAATTTCAAAGCTGAGCATACAGAAAAAGTTGAGTCCAAACCAGGATCAAAGGTTTTGCTAGCTTATGATAGTATTTCAATTGTCACAAAAGCTTTAGAGAAAATGAAAACTAATTCAATTAGTTCAAAGATGTTATTGGAGGAAATGGTATCTTCCAATTTCAATGGCTTAATTGGAAATATAAGATTCAAAGAAAGACAACTATCCTACACTCCAATATTAAGAGTCATAAAAGTGGTTATTAATGACAAGAAACTTACGGAATTGGACTTTTGGCCACCAAATTTGAAGTTTGCTGCAAGTGATGGTACTACAGAAACTAAGACATGGAAAGTACCTACTCATACAAACCCTTTAAAAGTTGCAATTCCTATGTATCCTTCAGGGGATAAATTTTTGAAAGTCTCTCAAAATCATTCTGCTACCGGTTTTTGTATTGATCTTTTCAATGGTATCCGAGAAATTTTGAGTGACAAGTATTCCGGTCTTCCCTATAGATTTTACACTTTCACTGAATCTTATGATACTATTCTACCGAAAGTCATAGATGGGACCTATGACGCTATTGTAGGAGATATAACAATACTTTCCGAGCGATCAAGGAATGTATCATTCACTCAACCATATACCGAGTCGGGCTTATCGCTCATATTTTCTGCTGAAAATGAAGACTCAGCATGGTTGTTTATGAAACCATTTAGCTGGGAAATGTGGTTTGCAACCATTGGAATCCTCATCTACACAATGATTATCCTTTGGTTCTTGGAACATCACTTGAATCCTAAATCCGGTGGACCATTGAAAAATCAGATCAGCACCACTATGTGGTTTACTTTTTCTTCTCTATTTTTTGCTCACAGGGAGAAAATAAACAGCAACTCGGCAAAAGTAGTAGTTGGAGTATGGTTATTTCTTGTGTTGGTTCTAACTTCAAGCTACACTGCAAATCTTTCATCATTGCTTACTGTCCAAAAACTGAGGTCTGAGAGAGACATTGAATGGCTTAAACAAAACAAACTACCAGTTGGTTGTGATAACAAGAGTACCTTTCTAAAGGACTACTTGGTCCAAGTGTATGATTTCCCTACGGACCAAGTTGTAGATATCGAGAATGAACAAGACATTGTGGATAAATTCAAGAGCAAGAAAATTTCTGCTATCTTTACTGAGAGCCCATATGTGAAGGTTTTCTTGAATAAACACTGCAAAGATTACACTGCAACTACTGCAGCCTATAAATTTGGAGGAATGGGATTTGTATTTCAAAAAGGGGCTCCAATAGCAAGAGACTTTTCTGAGGCCATTCTAACACTAGCAGAAAATGGAAGACTACAAGCTTTGGAAGAGTATTGGTTAACACCTCCTAATAAATGCTCAAACAACTCACCTTCTCCAAAAACTGAGAGCCTGACCCTTGGCAAATTTTGGGGACTTTATGTCATATGTGCTGCCACTTCCACCATCTGCTTAGGACTAGCCTTATTGAACAAGTATTTCCGTAAACATAACCACGTTGAAGATGAAGCTCATCAACTTCCTCAAAGAGATGTAATCGCCATACCTGATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGTGATTTGAAGAAATCATTTAGATGTGGTAGAGTATTACATAATGGAAATATCATGACTTTAAATAAATCTGCAACTTTTGGAGGTAGTTTAGGTGTACGTCGTAGAAATTCACCAAGGTTGGAAAGTGTAATCATTTCTGATGAACTGCGCAATCCACAATGTGCCCAATCAGCTGTCATAGAAATGATGTAA 2754 0.3533 MNFFAQTSNSVPNSLLWLTLIISLFLFQCVADSSQTTSVGVIIDVNSETGKQQIKAMQLAAQRFNNYSNNQNIILFFRDSARNSLQAASAAEELITKEEVKVIIGMETWQEAALVADLGAKFQIPTISFSSPPLLVSSSSTQLRWPFLIQMAQNHSIQMNYIADTVHALNSQKVIVIYEDNPYSSDFGMLSLLSEALEKANSKIEYQLVLPPFNFLSDPKWFVLDELLKLFPLKSRVFIVLQASLPMVNHLFREAKKIGLLEKDSSWIINEEITSMLDCIDKSVLSSMEGVLGIKVNYSTSSSAYTQLCENFKAEHTEKVESKPGSKVLLAYDSISIVTKALEKMKTNSISSKMLLEEMVSSNFNGLIGNIRFKERQLSYTPILRVIKVVINDKKLTELDFWPPNLKFAASDGTTETKTWKVPTHTNPLKVAIPMYPSGDKFLKVSQNHSATGFCIDLFNGIREILSDKYSGLPYRFYTFTESYDTILPKVIDGTYDAIVGDITILSERSRNVSFTQPYTESGLSLIFSAENEDSAWLFMKPFSWEMWFATIGILIYTMIILWFLEHHLNPKSGGPLKNQISTTMWFTFSSLFFAHREKINSNSAKVVVGVWLFLVLVLTSSYTANLSSLLTVQKLRSERDIEWLKQNKLPVGCDNKSTFLKDYLVQVYDFPTDQVVDIENEQDIVDKFKSKKISAIFTESPYVKVFLNKHCKDYTATTAAYKFGGMGFVFQKGAPIARDFSEAILTLAENGRLQALEEYWLTPPNKCSNNSPSPKTESLTLGKFWGLYVICAATSTICLGLALLNKYFRKHNHVEDEAHQLPQRDVIAIPDNNNNNNNNNNNNNNNNNNNNNSDLKKSFRCGRVLHNGNIMTLNKSATFGGSLGVRRRNSPRLESVIISDELRNPQCAQSAVIEMM* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2994 917 SMART GluR_14 428 764 IPR001320 GO:0015276|GO:0016020
Tpr7g2994 917 PIRSF IGluLR_plant 10 865 IPR017103 -
Tpr7g2994 917 Pfam Receptor family ligand binding region 55 377 IPR001828 -
Tpr7g2994 917 SUPERFAMILY Periplasmic binding protein-like I 35 393 IPR028082 -
Tpr7g2994 917 Gene3D - 663 765 - -
Tpr7g2994 917 SUPERFAMILY Periplasmic binding protein-like II 412 763 - -
Tpr7g2994 917 Gene3D - 537 662 - -
Tpr7g2994 917 Gene3D - 154 301 - -
Tpr7g2994 917 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 914 - -
Tpr7g2994 917 Pfam Bacterial extracellular solute-binding proteins, family 3 448 763 IPR001638 -
Tpr7g2994 917 Gene3D - 423 536 - -
Tpr7g2994 917 Pfam Ligand-gated ion channel 764 794 IPR001320 GO:0015276|GO:0016020
Tpr7g2994 917 Gene3D - 45 379 - -
Tpr7g2994 917 PANTHER GLUTAMATE RECEPTOR 2 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2994 Tpr-Chr7 37208469 37212371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2994 17 814 Ion Channels AT2G29120 30.556 4.38e-116 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2994 - - mtr:MTR_2g015290 1251.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2994 7 37208469 37212371 Tpr7g2994 7 37208469 37212371 ECH