Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2993 ATGTTATCTATATATAATACACTTTATTCCACCAAAAAATCTATAAAACAGTTTTTAGCCACCAATATGAATTTTTTTGCTCAAACTTCGAACTCAGCTCCAAATCTTTTGCTTTGGCTTCCTCTAATAATCTCACTTTTCCTTTTCCAATGTCTTGCCAATAGTTCTCAAACTACGAGTGTGGGTGTTATCATTGATGTTAATTCTGAAACAGGGAAACAACAGACAAAAGCCATGCAACTTGCAGCTCAAAGATTCAATAGTTATTCCACCAATCAAAACATAATACTTTTCTTCCGTGACTCTGCAGGAAACCCTTTACAAGCAGCTTCAGCCGCTGAAGAATTAATTACTAAACAGAAAGTTAAAGTGATTATTGGCATGGAAACATGGCAAGAAGCAGCTCTTGTTGCTGACCTTGGAGCCAAGTTTCAAATACCAACAATTTCATTTTCTTCTCCTCTATTAGTCCCTTCATCATCAATGCAACTTCGTTGGCCTTTCTTGATTCAAATGGCACAAAATCATTCCGCACAAATGAACTTCATAGCTGATATGTTACATGCTTTCAACTCTAAAAAAGTTATAGCTATATATGAAGACAACCCTTATAGTAGTGATTCTGGAATGTTAAGCCTCTTGTCTGAGGCTCTAGAAAAGGTTAACTCGCAGATTGAGTATCGATTAGTTCTTCCACCATTCACTTCTTTGTCTGACCCAAAAGGGTTTGTTCTTGATGAATTGTTGAAGTTGTTGCCGTTAAAATCTCGTGTTTTTATCGTACTTCAAGCATCGTTACCTATGGTCAACCATTTGTTTAGAGAAGCTAAGAAAATTGGACTATTGGAGAAAGATTCATCTTGGATAATCAATGAGGAGATTACAAGCAAGTTGGACTATGTAGATAAATCTGTCTTATCTTCTATGGAAGGTGTCTTGGGAATCAAAACCAACTATTCTAATAGCTCTAGTGCTTATACTCAATTGTGTGAAAATTTGCAAACTGAGCATACAGAAAAAGTTGAGTCCAAACCAGGATCAAAGGTTTTGCTAGCTTATGATAGCATTTCAATTGTCACAAAGGCTTTGGAGAAAATGAATTCTAACTCAATTAGTTCAGAGATGTTATTGGAGGAAATGGTATCTTCCAATTTCAATGGCTTAGTTGGTGATATAAGATTCGAAGAAAGGCAACTATCCTACTCTCCAATATTAAGAGTCATTAAAGTTGTTGATAATGATAATAAATATATTGAATTGGACTTTTGGACACCAAAGTTGAAGTTTGGTAGATCTCTTAGTGAGAAAACAAGTGATGGTACAACAGAAACTAAGACATGGAAAGTACCTACAGTTACAAACCCTTTAAAAGTTGCACTTCCTATGAATCCTGCATTTGATAACTTTTTGAAATTCTCTGATAATCAACCACCTACCGGTTTTTGTATCGCTCTTTTTAAAGAGATTCGAGAAATTCTGAGTGACCAGTATTCTGGTCTTCCCTATAAATTCGACCCCTTCAATGAAACTTATGATAAGCTTTTGTGGAAAGTCATAAATGAGTCCTATGATGCTATTGTAGGAGATATAACAATACTTTCCGAGCGATCAAGGAATGTATCATTCACTCAACCATATACGGAGTCGGGCTTATCACTCATATTTCCTGCAGAAAATGAAGATTCAGCATGGTTGTTTATGAAACCATTTAGCTGGGAAATGTGGTTTGCAACTGTTGTTATCCTCATCTACACTATGTTTATCATTTGGTTCTTGGAACATCACTTGAATCCTGAATTTGGTGGACCATTGAAATCACAGATCAGCACCACTCTGTGGTTTGCATTTACTTCTCTATTTTTTGCTCATAGGGAGAACATAAGCACCAACACAGCAAGAGTAGTAGTTGCAGTATGGTTATCTCTTGTGTTTGTTCTAACCTCAAGCTACACTGCAAATCTTTCATCATTGCTTACTGTCCAAAAATTGAGGTCTGAGAGAGACATTGAATGGCTTAAACAAAACAGACTACCGGTTGGTTGTGATAACAGCAGTACCTTTGTAAAGAACTACTTGGTCCAAGTGTATAATTTCCCCAGTGACCAAGTTGTAGATGTTGATAATGAACAAGACATTGTGGATAAATTCAAGAGCAAAAAAATTTCTGCTCTTTTTCTTGAGAGCCCATATGAGAAGGTTTTCTTGAATAAATACTGCAAAGATTACACTGGAACTACAGCAGCCTATAAATTTGGAGGAATGGGATTTGTATTCCAAAAAGGGGCTCCAATAGCAAGAGACTTTTCTGAGGCCATTCTAACACTAGCAGAAAATGGAAGACTAAAAACTTTGGAAGAATATTGGTTGACACCTTCTAATAAATGCTCAAACAACTCAGCTTCTCCAGAAACTGAGAGTCTGACTCTCGACAAATTTTGGGGACTCTATGTCATATGTGCTGCCACGTCCACCATCTGCTTAGGACTAGCCTTATTGAACAAGTATCTCCATAAACATAACCACTATGAAGAGGAAGCTCGTCAACTTTCTCAAAGAGATGTCATCGCCGAATCTGATGATGATAATAATAATAATGATATGAAGAATTCATCAAGATATGGTAGAGTATTACATAACGGGAATCTTGCGACTTTAAATAAATCTGCAACTTTTGGAGGAAGTTTAATACAAGGTGTACGTCGTAGAAATTCGCCGAGGTTGGAGAGTGTAATCATTTCTGATGAACCGGGCAATCCACAACGCGCCCAATCAGCCTCCCAATCAGCTGTCATAGAAATGATGTAA 2805 0.3679 MLSIYNTLYSTKKSIKQFLATNMNFFAQTSNSAPNLLLWLPLIISLFLFQCLANSSQTTSVGVIIDVNSETGKQQTKAMQLAAQRFNSYSTNQNIILFFRDSAGNPLQAASAAEELITKQKVKVIIGMETWQEAALVADLGAKFQIPTISFSSPLLVPSSSMQLRWPFLIQMAQNHSAQMNFIADMLHAFNSKKVIAIYEDNPYSSDSGMLSLLSEALEKVNSQIEYRLVLPPFTSLSDPKGFVLDELLKLLPLKSRVFIVLQASLPMVNHLFREAKKIGLLEKDSSWIINEEITSKLDYVDKSVLSSMEGVLGIKTNYSNSSSAYTQLCENLQTEHTEKVESKPGSKVLLAYDSISIVTKALEKMNSNSISSEMLLEEMVSSNFNGLVGDIRFEERQLSYSPILRVIKVVDNDNKYIELDFWTPKLKFGRSLSEKTSDGTTETKTWKVPTVTNPLKVALPMNPAFDNFLKFSDNQPPTGFCIALFKEIREILSDQYSGLPYKFDPFNETYDKLLWKVINESYDAIVGDITILSERSRNVSFTQPYTESGLSLIFPAENEDSAWLFMKPFSWEMWFATVVILIYTMFIIWFLEHHLNPEFGGPLKSQISTTLWFAFTSLFFAHRENISTNTARVVVAVWLSLVFVLTSSYTANLSSLLTVQKLRSERDIEWLKQNRLPVGCDNSSTFVKNYLVQVYNFPSDQVVDVDNEQDIVDKFKSKKISALFLESPYEKVFLNKYCKDYTGTTAAYKFGGMGFVFQKGAPIARDFSEAILTLAENGRLKTLEEYWLTPSNKCSNNSASPETESLTLDKFWGLYVICAATSTICLGLALLNKYLHKHNHYEEEARQLSQRDVIAESDDDNNNNDMKNSSRYGRVLHNGNLATLNKSATFGGSLIQGVRRRNSPRLESVIISDEPGNPQRAQSASQSAVIEMM* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2993 934 MobiDBLite consensus disorder prediction 916 934 - -
Tpr7g2993 934 PANTHER GLUTAMATE RECEPTOR 24 927 - -
Tpr7g2993 934 Pfam Receptor family ligand binding region 76 399 IPR001828 -
Tpr7g2993 934 SUPERFAMILY Periplasmic binding protein-like I 57 483 IPR028082 -
Tpr7g2993 934 Gene3D - 175 404 - -
Tpr7g2993 934 Gene3D - 564 697 - -
Tpr7g2993 934 SMART GluR_14 457 791 IPR001320 GO:0015276|GO:0016020
Tpr7g2993 934 MobiDBLite consensus disorder prediction 915 934 - -
Tpr7g2993 934 Gene3D - 66 402 - -
Tpr7g2993 934 Pfam Bacterial extracellular solute-binding proteins, family 3 472 790 IPR001638 -
Tpr7g2993 934 SUPERFAMILY Periplasmic binding protein-like II 445 790 - -
Tpr7g2993 934 Gene3D - 451 563 - -
Tpr7g2993 934 Gene3D - 734 797 - -
Tpr7g2993 934 Pfam Ligand-gated ion channel 791 821 IPR001320 GO:0015276|GO:0016020
Tpr7g2993 934 Coils Coil 832 852 - -
Tpr7g2993 934 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 24 927 - -
Tpr7g2993 934 PIRSF IGluLR_plant 32 909 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2993 Tpr-Chr7 37162553 37207917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2993 51 841 Ion Channels AT2G29120 31.221 3.15e-121 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2993 - - mtr:MTR_2g015290 1286.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2993 7 37162553 37207917 Tpr7g2993 7 37162553 37207917 ECH