Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2992 ATGAATATTTATGCTGAAACATCAAACTCAGTTCCAAATATTTTGCTTCGCCTTCCTCTAATAATCATGCTTTTGCTATTCCATTGTCTTGCTGGTAGTTCCCAAACTACAACAAGTATTGGTGTGATCATTGATGTTAATTCTGAAACAGGGAAACAACAGAGAACAGCCATGCAAATTGCAGCTCAAAGTTTCAACAATTATTCGAACAATCAAAACATAATCCTTTTCTTCCGGGACTCTAATAGAAACCCTTTACAAGCAGCTTCAGATGCTGAAGAATTAATTACTAAAGAGAAAGTAAAAGTGATTATTGGCATGGAAACATGGCAAGAAGCAGCCCTTGTTGCTGATCTTGGAGCCAAGTTTCAAGTACCAACAATTTCATTTTCTTCTCCCCCATTAGTCTCTTTATCATTAATGCAACTTCGTTGGCCTTTCTTAATTCAAATGGCACATAATCATTCTGCACAAATGAACTTCATAGCTAATATGATCCATGCTTTCAACTCTCAACAAGTTATAGCTATATACGAGAACAACCCTTATAGTACTGATTCTGGAATGTTAAGCCTCTTATCCGAGGCTCTCCAAAAGGTAAACTCGCATATTGAGTATGTCTTAGTTCTTCCACCATTCATTTCTTTATCTAATCCAAAAGGGTTTGTTCTTGATGAATTGTTGAAGTTACTGCCATTAAAATCTCGTGTTTTTATTGTACTTCAAGCATCGTTACCTATGGTGAACTATTTGTTTACCGAAGCTAAGAAAATTGGATTATTGGAGAAAGATTCATCCTGGATAATCAATGAGGAGATTACAAGCATGTTGGGCTATATAGATAAATCTGTTTTATCTTCAATGGAGGCTGTTTTGGGAATCAAAAACAACTACTCTACTAGCTCTAGTGCTTATACTCAATTGCGTGAAAATTTGCAAGCTGATCATACAGAAAAAGTTGAGTCGGAACCAGGATCAAAGGTTTTGCTAGCTTATGATAGCATTTCAACTGTCACAAAGGCTTTAGAGAAAATGAATACTAATTCAATTAGTTCAAAGATGTTGTTGGAGGAAATGGTATCTTCCAATTTCAATGGCTTAATTGGAGATATAAGATTCAAAGAAAGACAACTATCCAACACTCCAATATTAAGAGTCATAAAAGTGGTTGATAATGATAAGAAAGTAATGGAATTGGACTTTTGGACTCCAAAGTTGAAGTTTGCTGAATCTCTTAGTGAGAAAACAAGTGATGGTACTACAGAAACTAGGACTTGGAAAGTACCTACAGTTACAAACCCTTTAAAAGTTGCAATTCCTATGTATCCTATAGTCGATAAATTTTTGGAAGTCTCTCAAAATCATTCTGCTTCCGGTTTTTGTATTGATCTTTTCAATGAGATCCGAGTAATTTTGAGTGACCAGTATTCCGGTCTTCCATATAGATTTTATACTTTCACTGAATCTTATGATACTATTCTACCTAAAGTCATAGATGAGACCTATGATGCTATTGTAGGAGATGTAACGATACTTGCCGACCGATCAAGGAATGTATCATTCACTCAACCATATACTGAGTCGGGCTTATCACTCATACTTCCTGCAGAAAATGATGATTCAGCATGGTTGTTTATGAAACCATTTAGCTGGGAAATGTGGTTTGCAACTGTTGTTATCCTCATCTACACAATGTTTATCATTTGGTTCTTGGAACATCGCTTGAATCCAGAATTTGGTGGACCATTGAAAACCCAGATCAGCAACACTCTGTGGTTTGCTTTTTCCTCTCTATTCTCCGTTCATAGGGAGAAAATAAACAGCAACTCAGCCAGAGTAGTAGTTGGAGTATGGTTATTTCTTGTGTTGGTTCTAACCTCAAGCTACACTGCAAATCTTTCATCATTGCTTACTGTCCCAAAATTGAGGTCTGATAGAAACATTGAATGGCTTAAACAAAACAATCTACCAATTGGTTGTGCTAGCACCAGTGCTTTTCTAAAGAACTATTTGATCCAAGTATATAATATCCCTCGGCACCAAATTGTCGATGTTGGGGGTGAAGATGACTATATGGATAAATTCAAGAACAAAAAAATTTCTGCTATCTTTGCTGAGAGCCCATATGTGAAGCTTTTCTTGAATAAACACTGCAAAGATTACATTGCAACTACAGCTGCCTATAAATTTGGAGGAATGGGATTTGTGTTTCAAAAAGATGCTCCAATAGCAAAGGACTTTTCTGTAGCAATTTTAACACTAGCAGAAAATGGAAAACTAAAAGCTTTGGAAGACAAATGGTTAACACCTTCCAATCAATGCTCAAACAACTCACCATCTCCACAAACTGAGAGTCTGACTCTTAATAAATTTTGGGGAATCTATTTAATATGTGCTGCCACTTCCACCATCTGCTTATTACTAGCTTCATTGAAGAAGTACTTATGTAAAGGAAATGTAATCGCAGAATATGATGATAATAAAGGTAATCAAAATTGGACTGGACTGGATCGGCCGGTTCAACTGGTTGAATTTGGAACCGAATTTGCATCCGGTCCGATCAACACTTCAAACCGCTATGCATCCGGTCCAATCAACACTTCAAACCGCTATGTATCTGGTTCGTACAACACTTCAAACCGCTATGATAACACTTCAAACTGCTGTGATACAGAACTGGATATAAAACCAGTCTGA 2697 0.3652 MNIYAETSNSVPNILLRLPLIIMLLLFHCLAGSSQTTTSIGVIIDVNSETGKQQRTAMQIAAQSFNNYSNNQNIILFFRDSNRNPLQAASDAEELITKEKVKVIIGMETWQEAALVADLGAKFQVPTISFSSPPLVSLSLMQLRWPFLIQMAHNHSAQMNFIANMIHAFNSQQVIAIYENNPYSTDSGMLSLLSEALQKVNSHIEYVLVLPPFISLSNPKGFVLDELLKLLPLKSRVFIVLQASLPMVNYLFTEAKKIGLLEKDSSWIINEEITSMLGYIDKSVLSSMEAVLGIKNNYSTSSSAYTQLRENLQADHTEKVESEPGSKVLLAYDSISTVTKALEKMNTNSISSKMLLEEMVSSNFNGLIGDIRFKERQLSNTPILRVIKVVDNDKKVMELDFWTPKLKFAESLSEKTSDGTTETRTWKVPTVTNPLKVAIPMYPIVDKFLEVSQNHSASGFCIDLFNEIRVILSDQYSGLPYRFYTFTESYDTILPKVIDETYDAIVGDVTILADRSRNVSFTQPYTESGLSLILPAENDDSAWLFMKPFSWEMWFATVVILIYTMFIIWFLEHRLNPEFGGPLKTQISNTLWFAFSSLFSVHREKINSNSARVVVGVWLFLVLVLTSSYTANLSSLLTVPKLRSDRNIEWLKQNNLPIGCASTSAFLKNYLIQVYNIPRHQIVDVGGEDDYMDKFKNKKISAIFAESPYVKLFLNKHCKDYIATTAAYKFGGMGFVFQKDAPIAKDFSVAILTLAENGKLKALEDKWLTPSNQCSNNSPSPQTESLTLNKFWGIYLICAATSTICLLLASLKKYLCKGNVIAEYDDNKGNQNWTGLDRPVQLVEFGTEFASGPINTSNRYASGPINTSNRYVSGSYNTSNRYDNTSNCCDTELDIKPV* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2992 898 Gene3D - 430 542 - -
Tpr7g2992 898 PANTHER GLUTAMATE RECEPTOR 2 841 - -
Tpr7g2992 898 Gene3D - 543 677 - -
Tpr7g2992 898 Pfam Ligand-gated ion channel 770 800 IPR001320 GO:0015276|GO:0016020
Tpr7g2992 898 PIRSF IGluLR_plant 12 848 IPR017103 -
Tpr7g2992 898 CDD PBP1_GABAb_receptor_plant 39 412 IPR044440 -
Tpr7g2992 898 Gene3D - 40 381 - -
Tpr7g2992 898 SUPERFAMILY Periplasmic binding protein-like II 424 769 - -
Tpr7g2992 898 Pfam Receptor family ligand binding region 55 389 IPR001828 -
Tpr7g2992 898 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 841 - -
Tpr7g2992 898 Pfam Bacterial extracellular solute-binding proteins, family 3 454 769 IPR001638 -
Tpr7g2992 898 Gene3D - 678 776 - -
Tpr7g2992 898 SUPERFAMILY Periplasmic binding protein-like I 33 398 IPR028082 -
Tpr7g2992 898 SMART GluR_14 436 770 IPR001320 GO:0015276|GO:0016020
Tpr7g2992 898 Gene3D - 154 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2992 Tpr-Chr7 37154945 37161873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2992 23 808 Ion Channels AT2G29120 30.981 1.57e-119 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2992 - - mtr:MTR_2g015290 1181.78