Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2964 ATGCCAACTCCTTCATCATCATCTTCTTCTTCTATTTGGGTTCTTTCTAACATAAAACTTCAATTCTTTACTCGTATCAGAAGGTTTCTTCGATCAAAAGCAACCCGAAAACGCTGTGAAGCTTCCAATTGTTTAAACAGAGAAGAAAATACTCAAAATAGAGATGAACAGAACAAGGTTGAAAAGATTGAAACAGTTGAAGTTATGGAGAACCATAAGGAGGAGGAGGATGTGGAGGAAACTGAAATTTTGCTGCAGAAGACGGTGAAAATGCTTCATTTTGGAAGCTGGGAAGAGAAGGAAGTAGCTGCAAAAGAGATTGAAAGTTTAGTAAAAGAAGATGTTAAAGTTAGAAAGTTGATAAGTGAACTCGGGGTTGTGCCGGTTTTGGTATCCATGGTGGCGTCGCAGGTGGCTAGTCGCCGGAGTTCAGGGTTGACGGCGTTGATCCATCTAGCTGATGGAACTTACACGAACAAGGCTTTGATAGTGGAGGCAGGACTATTATCCAATCTACCTAAGAAAATTGACCTTATAGATGAGTCAACCATGAATGAGTTTGCAGAGTTACTTTTATCATTATCATCACTTGCAAATACCCAATTCCCTTTTGCTTCATTAGATTTTATCCCATTTCTTAAAGACGTTCTTGAAAAAGACACAACTTTTGATACCAAAAGATCATGTTTAGGAGCCTTATACAACCTATCAACAATGTTAGAAAATGCAAGCTCTTTAGTTTCTTATGGTCTTGTCCCAATTTTATTGGAACTTTCCTTAGTAAAAGAAATTTCAGAAAAAACACTTGCTACTTTAGGTAACTTGTTGGTTACTCCATTGGGAAAAAAAGCAATAGAAAATAGTTCAATGGTGCCACAAAACTTTGTTGAGATTTTATCATGGGAAGATAAACCAAAATGTCAAGAGTTATCTGTTTATATTTTGATGATTTTAGCTCATCAAAGTATATCACAAAGAGAGAAAATGGCACAAGCTAGGATTGTTCCTATGCTTCTTGAAGTTGTTTTATTGGGAAGTCCTTTAGCTCAAAAGAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAAAGGCAAATTAAGATGGGGCCACATTCTGGTCCACAATCACCAAGATTTGCAATGGGGTCACCTTTGAATCAAAGAGATGCAAAAGAAGGGAAGAACATGATGAAGAGTTTGGTCAAACAAAGCTTGCATAAGAATTTGGAAATAATAACTCAAAGGGCAAATGCAAATGGAGAGTCTTCTAAACTTAAGTCATTGGTTATTAGCACAAGTTCCAAGAGTTTGCCTTATTGA 1320 0.3674 MPTPSSSSSSSIWVLSNIKLQFFTRIRRFLRSKATRKRCEASNCLNREENTQNRDEQNKVEKIETVEVMENHKEEEDVEETEILLQKTVKMLHFGSWEEKEVAAKEIESLVKEDVKVRKLISELGVVPVLVSMVASQVASRRSSGLTALIHLADGTYTNKALIVEAGLLSNLPKKIDLIDESTMNEFAELLLSLSSLANTQFPFASLDFIPFLKDVLEKDTTFDTKRSCLGALYNLSTMLENASSLVSYGLVPILLELSLVKEISEKTLATLGNLLVTPLGKKAIENSSMVPQNFVEILSWEDKPKCQELSVYILMILAHQSISQREKMAQARIVPMLLEVVLLGSPLAQKRAMKLLQWFKDERQIKMGPHSGPQSPRFAMGSPLNQRDAKEGKNMMKSLVKQSLHKNLEIITQRANANGESSKLKSLVISTSSKSLPY* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2964 439 SUPERFAMILY ARM repeat 88 359 IPR016024 -
Tpr7g2964 439 Coils Coil 46 66 - -
Tpr7g2964 439 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 75 439 - -
Tpr7g2964 439 Gene3D - 49 417 IPR011989 -
Tpr7g2964 439 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 75 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2964 Tpr-Chr7 36937038 36940367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2964 98 386 U-box Gene Family AT1G67530 29.470 5.89e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2964 - - gmx:100813828 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2964 7 36937038 36940367 Tpr7g2964 7 36937038 36940367 ECH