Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2952 ATGCCGGATTTTCACGATTCTCTCTCTCCACCACCACCACCACCGCCGTCGTCTCGCCCTATCCCCGTTCGCGAGGATTGTTGGTCAGAAGAAGCTTCTTCTACTCTCGTTGATGCATGGGGTAATCGTTATCTTGAACTCAACCGTGGTAATCTTCGTCAGAAAGATTGGCAAGATGTTGCTGATGCTGTTAACGCTCTTCATGGTCATACTAAGAAAACTCATCGCACCGATGTTCAGTGTAAGAATCGAATTGATACTATTAAGAAAAAGTATAAGATCGAGAAAGCTAGGGTTTCCAATTCCAATGGTGTTTTTTCATCGCCTTGGCCTTTTTATGATCGATTAGATTTATTGATTGGTCCTAATTTCAATACCAAGAAATCTTCTTCTTCTCCATCACCTTCTCCACCTGTTGCTCTTCCTTTGGTTCCTCATCGGAAATTTTCTAATTCGCCGAATGCGATTTCTGTTACTCCGGCTGCTGTTGCTCTTCCTCAGAAGAGGTCACTTGCGACGGTGATGGATGATGGTTATTTTAGGAGGAATTATTCTGCTGTTGCTGCTGCGGCTGCTGCTGCGGAGGCTGATGAAGATGAGGATGAGGAGGATGAAGAGGAGGAAGTTGAGGAGGAGGAGGAGGAGGTTGAGGTTGAGGAGGAAGAAGGGAGGGGAAGTGAAGTTGATGAAGGGGATAAAGGGAGGGAAGGGATGAAGAGGTTGGCTAAGGCTATTGAGAAATTTGGTGAAATGTATGAGAGAGTTGAGGGACAGAAACTGAGGCAGATGGTGGATTTGGAGAAACAAAGGATGGAGTTTGCTAAAGATATTGAAGTGCAGAGGATGCAGATGTTTATGGATACACAAGTTCAGATGGAGAGAATCAAGCGTGGGAAGCGTTCTGGGTCTAATGATATGTATAGCTAG 927 0.4509 MPDFHDSLSPPPPPPPSSRPIPVREDCWSEEASSTLVDAWGNRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSNSNGVFSSPWPFYDRLDLLIGPNFNTKKSSSSPSPSPPVALPLVPHRKFSNSPNAISVTPAAVALPQKRSLATVMDDGYFRRNYSAVAAAAAAAEADEDEDEEDEEEEVEEEEEEVEVEEEEGRGSEVDEGDKGREGMKRLAKAIEKFGEMYERVEGQKLRQMVDLEKQRMEFAKDIEVQRMQMFMDTQVQMERIKRGKRSGSNDMYS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2952 308 MobiDBLite consensus disorder prediction 1 24 - -
Tpr7g2952 308 Coils Coil 189 222 - -
Tpr7g2952 308 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 304 IPR044823 -
Tpr7g2952 308 MobiDBLite consensus disorder prediction 1 21 - -
Tpr7g2952 308 Gene3D - 28 94 - -
Tpr7g2952 308 PANTHER OS05G0560600 PROTEIN 2 304 - -
Tpr7g2952 308 MobiDBLite consensus disorder prediction 194 226 - -
Tpr7g2952 308 MobiDBLite consensus disorder prediction 190 238 - -
Tpr7g2952 308 Pfam Myb/SANT-like DNA-binding domain 25 118 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2952 Tpr-Chr7 36806187 36812211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2952 231 307 Trihelix Transcription Factor Family AT3G14180 46.914 1.06e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr7g2952 Myb_DNA-bind_4 3.1e-24 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2952 7 36806187 36812211 Tpr7g2952 7 36806187 36812211 ECH