Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2942 ATGAAACCAAGAAAAAATATGAAACCCTTTTATAAGTTCTTGATTCTCCTATCACTTATTACTCTCACAGAATCATCATCTTCTTCATGCAACATTGAAAACAAGAACCTAGTATCAAAAGCTTTCCAATTTGTCTCAGGATTCAACACTTCCTTATTCCAAACAAATTCCTTCAACTGTTCTTCAAAGGGTGAAATTAACATCATAGAACTTCAATCCAAAAACTTAACAGGAAACATCTCATGGAGATACCTAAGAAACATGACAAAGTTAGAGCTTCTTGATCTTTCTGGAAATTTTCTACAAGGTCAAATACCAAACTGGTTTTGGAGAAGTTTTTCAAGTTTGTCAAAAGTGAATCTTTCTAACAACAGATTCGGTGGAAGCATTGCATTGACAACAAAAACAAAACCCATTTCTCAAAATGGTTCCTTTTTCTCATCTTCACTACAAAAACTCAATCTTTCACATAACAGGTTCACAAATCAAGTTCAACTTTCAGTTTTTCATAACCTTAAAATCCTCGACCTTTCATACAACAACCTTAACACTTTACCTTATGGTTTTCAAAACCTTACAAATCTTAACTATCTTGATCTCTCAAACTGTAACATCAAAGGTAACATAAAACCCATTTCTTACCTTAAATCACTTTCTTCCTTAAACCTTTCAAATAACTCTTTGAATGGTAGTTTCCCTTTTGATTTTCCATCTCTTAACAACCTTAAATTCCTCAACATCTCAAACAATAACTTCAACTCTTCAATTTCCTTAAACAAATTCATCAAAAAATTCGGAAAATCATCATTCATTCACGCTGGTAACAACTTCAATTCCAACAACAACAACAAATCATCCAAAAAAGTACCAAACATTCATTCAAATTCAATTTCAAATTCAACTCTACCACACCACTCCCAACAACTCCATATGAAAAAGACAAAACCCATTCACAATGAGAAAACAGAACACAAACACAAACAAAAACAAAAGTCAAAAACAAAAACCGTGATTATTGCCACAGTTTCCTCAGTATCATCAATTGTTTTTGTCGTGTTATGCATCTGGGCAATCTTAGTTTACAAAAAAAAGAGAACTTTAGCCAAAAAAAACAAATGGGCAATTTCAATATCAAAACCAATAACAGGATTAACAACAGCCGTTAAGATGGAGAAATCTGGACCGTTCGCTTTTGAAACAGAATCAGGAACATCATGGGTAGCTGATCTGAAAGAACCAACATCAGCATCAGTTGTAATGTTTGAGAAACCATTGATGAACATTACATTTGTTGATCTTATGAATGCCACGTCATACTTTGGAAAAGATTCTCAGTTAGCTGAAGGTAGATGTGGGCCAGTTTATCGTGCTGTTTTACCAGGTGAGTTACACGTGGCAATCAAGGTTCTTGAAAATGCTAGAGACGTTGATCATGATGACGCTGTTGATACTTTCGTTGACTTATCTCAGCTTAAACATCCTAATCTTTTGCCTCTCTCCGGTTATTGTATTGCAGGGAAGGAGAAGCTAGTGTTGTACGAGTTTATGTCAAATGGAGACTTAGGCAGGTGGCTACACGAACTACCAACGGGTGAAACCAACGTGGAGGATTGGAGTAGCGACACGTGGGAAATTCAAAATGGCGTCGGTTCACAAACCCCCTCACCAGAAAAAATGGGTTGGCCAACACGACACCGTATCGCTATAGGAGTAGCGCGTGGTCTAGCTTTTCTCCACCATGCAGGTTCAAAGCCTGTCGTTCACGGCCATTTGGTAACATCAAATGTCCTTCTCGCTGATGATTTTGAGCCTCGAATTGCTGATTTTGGGTTCCGAAAATTCGGGCAGCAATGTCCTCCGAATTGCAGCACCGAAACAGATGTTTATTGCTTTGGTGCGGTGCTTATGGAGCTTTTAACGGGGAAGCCTGGTACAGCAGAGACGGTTGTTTGGGTGAGGAAGCTTGTAAGAGAAGGTCATGGAGTGAGGGCGATTGATGAAAGGATGAAACTCGACGGTGGTGACTCAGAGAATCAAATGGTGGAGAGTCTTCGAGTTGCGTATTTATGTACTGCCGAGTCACCTGCGAAGAGGCCCACTATGCAACAAGTTTTAGGGCTTCTCAAAGATATTCATCCAAGAGGCGGACATAGATTGAGTTGA 2163 0.3833 MKPRKNMKPFYKFLILLSLITLTESSSSSCNIENKNLVSKAFQFVSGFNTSLFQTNSFNCSSKGEINIIELQSKNLTGNISWRYLRNMTKLELLDLSGNFLQGQIPNWFWRSFSSLSKVNLSNNRFGGSIALTTKTKPISQNGSFFSSSLQKLNLSHNRFTNQVQLSVFHNLKILDLSYNNLNTLPYGFQNLTNLNYLDLSNCNIKGNIKPISYLKSLSSLNLSNNSLNGSFPFDFPSLNNLKFLNISNNNFNSSISLNKFIKKFGKSSFIHAGNNFNSNNNNKSSKKVPNIHSNSISNSTLPHHSQQLHMKKTKPIHNEKTEHKHKQKQKSKTKTVIIATVSSVSSIVFVVLCIWAILVYKKKRTLAKKNKWAISISKPITGLTTAVKMEKSGPFAFETESGTSWVADLKEPTSASVVMFEKPLMNITFVDLMNATSYFGKDSQLAEGRCGPVYRAVLPGELHVAIKVLENARDVDHDDAVDTFVDLSQLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLHELPTGETNVEDWSSDTWEIQNGVGSQTPSPEKMGWPTRHRIAIGVARGLAFLHHAGSKPVVHGHLVTSNVLLADDFEPRIADFGFRKFGQQCPPNCSTETDVYCFGAVLMELLTGKPGTAETVVWVRKLVREGHGVRAIDERMKLDGGDSENQMVESLRVAYLCTAESPAKRPTMQQVLGLLKDIHPRGGHRLS* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2942 720 Gene3D Ribonuclease Inhibitor 138 313 IPR032675 -
Tpr7g2942 720 ProSiteProfiles Leucine-rich repeat profile. 171 193 IPR001611 GO:0005515
Tpr7g2942 720 SUPERFAMILY L domain-like 59 256 - -
Tpr7g2942 720 ProSiteProfiles Protein kinase domain profile. 440 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2942 720 Pfam Protein tyrosine and serine/threonine kinase 443 705 IPR001245 GO:0004672|GO:0006468
Tpr7g2942 720 Gene3D Transferase(Phosphotransferase) domain 1 516 619 - -
Tpr7g2942 720 Gene3D Transferase(Phosphotransferase) domain 1 620 713 - -
Tpr7g2942 720 SMART LRR_typ_2 88 112 IPR003591 -
Tpr7g2942 720 SMART LRR_typ_2 169 191 IPR003591 -
Tpr7g2942 720 SMART LRR_typ_2 215 238 IPR003591 -
Tpr7g2942 720 Pfam Leucine rich repeat 149 205 IPR001611 GO:0005515
Tpr7g2942 720 Gene3D Ribonuclease Inhibitor 27 137 IPR032675 -
Tpr7g2942 720 PRINTS Leucine-rich repeat signature 172 185 - -
Tpr7g2942 720 PRINTS Leucine-rich repeat signature 215 228 - -
Tpr7g2942 720 ProSiteProfiles Leucine-rich repeat profile. 194 216 IPR001611 GO:0005515
Tpr7g2942 720 SUPERFAMILY Protein kinase-like (PK-like) 418 708 IPR011009 -
Tpr7g2942 720 Pfam Leucine Rich Repeat 90 109 IPR001611 GO:0005515
Tpr7g2942 720 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 714 - -
Tpr7g2942 720 PANTHER KINASE, PUTATIVE-RELATED 9 714 - -
Tpr7g2942 720 Gene3D Phosphorylase Kinase; domain 1 400 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2942 Tpr-Chr7 36687293 36691507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2942 69 711 Receptor kinase-like Gene Family AT5G07280 29.956 4.87e-67 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Tpr7g2942 PK_Tyr_Ser-Thr 8.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2942 - - gmx:100778920 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2942 7 36687293 36691507 Tpr7g2942 7 36687293 36691507 ECH
Tpr3g1163 3 10517745 10520840 Tpr7g2942 7 36687293 36691507 PCT