Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2936 ATGGAAAGTGTTAAAGTGTTTTTTTGGTTTGTTTCCTTTATTTTTCTATGGAATTTGGTGTCTTTTGTTGTTGAGGGTACTGAAAGTCTTCTCTCTCCAAAGGGTGTTAACTATGAAGTGGCTGCTTTGATGTCTATGAAGAGTAAGATGAATGATGAATCACATGTTATGAATGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAACATGGTTGGTTGCTCTTCTGAGGGTTATGTCATTTCCTTGGAAATGGCTAGTGCAGGTTTATCTGGAATAATTTCCTCAGGAATTGGAAATTTGAGCCACCTCCGAACACTGTTATTGCAGAACAATCAGCTATCTGGTCCTATCCCGGTTGAGATAGGAAACCTGTTAGAACTTCAGACTCTTGATCTTTCCGGTAACCAGCTTGTTGGGAACATTCCTAGTTCTTTGGGCTATTTGACTCATCTTAGTTACCTGCGGCTCAGCAAAAATAAACTATCTGGACAGATCCCTCAACTTGTTGCTAATCTCACAGGACTTTCGTTCTTGGATTTGTCATTCAACAATCTCAGCGGTCCTACTCCAAAAATCTTAGCAAAAGGCTATAGTATTTCAGGAAACAACTTCCTTTGTACATCATCCTCACAAATTTGTATGGGCGGTTCGAAGCCAGTAAATGATACAGGGTCATCATCTCAGACAGTCAGAAGTCATCGACATACGGTGCTTTCTGTTGTTATTGGCTTTAGTTGCACATTTGTAATTTCAGTGATGCTTCTCGCCTATTGGTTACATTGGTACAAATCACGCATCCTCTATTCATCTTATGTGGAGCAAGATTGCGAATTTGGTATCGGTCATTTGAAGAGGTTCTCCTTCCGTGAATTGCAAATTGCTACTGGAAATTTCACTTCAAAAAATATCGTAGGACAAGGTGGTTTTGGTGTTGTATACAAAGGATGCCTTGCAAACAAAATGTTAGTGGCAGTAAAGAGGCTTAAAGATCCTAATTATACCGGAGAAGTGCAGTTTCAAACCGAAGTTGAGATGATTGGCTTGGCTGTACATCGTAACCTCTTGCGTCTTTATGGATTTTGTATGACACCAGATGAAAGGTTACTCGTTTATCCGTTCATGCCTAATGGCAGTGTTGCTGATCGCTTGAGAGAGAGTTTCCGGGGAAAGCCATGTTTGGATTGGAACAGGCGAATGCACATCGCTGTTGGGGCTGCACGAGGGCTTTTGTATTTGCACGAGCAGTGCAATCCAAAAATCATCCACAGGGATGTTAAGGCTGCAAACATTTTGTTAGATGAAAGTTTTGAAGCTGTGGTGGGAGATTTTGGTCTTGCTAAGCTCTTAGATCAAAGGGATTCACACGTAACTACTGCAGTACGCGGAACTGTAGGACACATTGCTCCCGAGTATCTCTCAACTGGACAGTCTTCTGAAAAAACAGATGTTTTTGGATTCGGCATATTACTTTTGGAGCTCATAACCGGACAAAAGGCACTGGATGCCGGAAACGTTCAGGTTCAAAAGGGAATGATTCTTGATTGGGCTAGAACTTTATTTGAGGACAAGCGGCTGGAAGTGTTAGTTGATAGGGATCTAAAGGGATGTTATGATCCGGTAGAGTTAGAAAAAGCGGTCGAGTTGTCTTTACAATGTACTCAATCTCTTCCTAGTTTGAGGCCAAAGATGTCAGAAGTTTTGAAGGTTCTTGAAGGGCTTATTGGGTTGTCAATGAGGCCTGAAGAGTCACAAGGAGGGGGTAACCTATATGATGAAAGGACTTGCAGTTTCTCTCAAAATTATAGTGATGTTCATGAAGAACCTTCCTTTATTATTGAAGCCATTGAGCTTTCTGGACCTAGGTGA 1872 0.4135 MESVKVFFWFVSFIFLWNLVSFVVEGTESLLSPKGVNYEVAALMSMKSKMNDESHVMNGWDINSVDPCTWNMVGCSSEGYVISLEMASAGLSGIISSGIGNLSHLRTLLLQNNQLSGPIPVEIGNLLELQTLDLSGNQLVGNIPSSLGYLTHLSYLRLSKNKLSGQIPQLVANLTGLSFLDLSFNNLSGPTPKILAKGYSISGNNFLCTSSSQICMGGSKPVNDTGSSSQTVRSHRHTVLSVVIGFSCTFVISVMLLAYWLHWYKSRILYSSYVEQDCEFGIGHLKRFSFRELQIATGNFTSKNIVGQGGFGVVYKGCLANKMLVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLVYPFMPNGSVADRLRESFRGKPCLDWNRRMHIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNVQVQKGMILDWARTLFEDKRLEVLVDRDLKGCYDPVELEKAVELSLQCTQSLPSLRPKMSEVLKVLEGLIGLSMRPEESQGGGNLYDERTCSFSQNYSDVHEEPSFIIEAIELSGPR* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2936 623 SUPERFAMILY Protein kinase-like (PK-like) 283 573 IPR011009 -
Tpr7g2936 623 Gene3D Transferase(Phosphotransferase) domain 1 376 577 - -
Tpr7g2936 623 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Tpr7g2936 623 Pfam Protein kinase domain 301 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2936 623 Gene3D Phosphorylase Kinase; domain 1 270 375 - -
Tpr7g2936 623 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Tpr7g2936 623 SUPERFAMILY L domain-like 38 208 - -
Tpr7g2936 623 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 623 - -
Tpr7g2936 623 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 623 - -
Tpr7g2936 623 SMART serkin_6 300 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2936 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Tpr7g2936 623 ProSiteProfiles Protein kinase domain profile. 300 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2936 623 Gene3D Ribonuclease Inhibitor 36 216 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2936 Tpr-Chr7 36629217 36633170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2936 44 623 Receptor kinase-like Gene Family AT5G45780 71.084 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Tpr7g2936 Pkinase 9.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2936 - - gmx:100810610 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2936 7 36629217 36633170 Tpr7g2936 7 36629217 36633170 ECH