Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2933 ATGGCCAAACTATGCTCTAGTTATTCTAATTTGCTCTGTATTCTCTCTGTCTCACTCTATTACTTCTTCTTCACTACTTGCTTAGCTAAAAGTACTAAAAACATCACCACAGATGAATTTTCACTTCTAGCATTCAAATCATCTATTACCTTAGACCCTTATCATATGCTTAGTAATTGGTCAATTTCCACTAATTCTTCTTCTTCTTCTTCTTTCTCTTCATGCAATTGGGTTGGTGTTACTTGTGATGAACATCATGGAAGAATAAATGCATTGAATCTTAGTAACATGGGCCTTGAAGGTACCATTTCCCCTCAACTAGGAAATCTTTCTTTTCTTGTTTTTCTTGATCTACAAGGCAATAATTTCCATGGTGAGTTACCACAAGAGTTACTTCAATTGCATAGATTGAAATGGTTGGATTTGAGTTACAATAATTTTGTTGGAGAAATCCCTTTAAGGATAGGGGACTTATCAAAACTTCAATATTTAGATCTTGGTTATAATAAAATTGTTGGATATATTCCTCAATCTATATCCAATTTGTCAATGTTGGAATACTTAGATTGGAAATCAAATTTGGTCAAAGGAACTATTCCACATGTTATTTGTCAACTTGGTAGGTTAAGAATTTTGGATGTTAGAAATAACAAACTCTCTGGAATCATACCATCCACAATTTCCAACATGTCTTCACTTGAAGAAATTCATTTGTCAAATAATTCATTATCAGGAGAAATTCCAAAAGGAATTGGTGATCTTACACAACTGACAATCTTGAACCTTCAAAATAATCTTCTCTTTGGCAACATATCATCAACAATATTAATGTTCAACAACTCATCATTGCAAAAATTGGCACTTGGTTTTAACAACCTCAGTGGCATTCTTCCATCAAATGTTTGTCAAGGACTTCCAAACCTTAAATTACTCTATCTTTATGTTAATGATTTTTCTGGTAAGATGCCAAATATTTGGCGTTTTTGCAAAGAGTTAGAAGATTTGGAGTTATCCTTCAATAATTTTGACAAAGGACATATGCCACCTGACATTGGAAACTTGATCAAGCTTCAATCTTTATATCTTACTAGCGTCAACTTGGAGGGTGAAATTCCACTCTCCCTCTTCAACATCTCTTCTTTAATGGAGATCAACCTTAATGGAAACAATTTATATGGAACTCTTCCACAAGAGATGTGTAATCAACTTCCTCAACTTGAGATTTTTACCTTATTTGGTAATCATTTTGAAGGAGCCATTCCACGATCAATTGGCAATTGCACATTATTGCAATCATTAACTTTACAGAATAATTTTTTTTCAGGTTCAATACCAATGGAGATTGGCAATCTCAATCAACTTCAGCTTCTACAAATGGGAAATAACAGCTTAAGTGGACCTATTCCTTCAAAAATCTTCAACATTTCAACATTGGAATATTTGCATCTTGAACAAAATTCTTTCACAGGCATGCTTCCATCTAACATGGGATTTGGCCTTCCTAACCTACAACAAATACACATATATGGAAACAAACTTGCTGGAAAAATTCCAAATAGTATATCCAATGCTTCAAATCTAGTCATAATTGACTTGAGTTCGAATGAGTTTAGTGGAAATATACCAAACTCATTTGGAAATTTAAGAGTCCTTGAATCACTCATCATAGCTGGCAATAATTTGACAATAGATGATTCTCTTGAATTTGACTTCTTAACTTCACTAACAAGTTGTAGATATTTGAAACATCTTGAAGTATCTAAGATAAGTTTCCAATCAAAACTTCCCAAGTCCATTGGAAACTTAACTTTAGAACACTTTTGGGCAAACTCTTGTGGAATTAATGGAAATATTCCACTAGAAATCGGAAACATGAGCAACCTGATTCGCTTATCTCTGAGTCATAATGATTTCCGTGGATCAATCCCGAGTACAATTAAAGGGTTACATAAACTTCAATCTTTGGATCTTAGCTACAATGGATTGCAAGGATCTATAGTTCATGAGCTTTGTGAAATTAGGAGTTTGAGTGAGTTGAATTTAACAAACAATAAGCTTTTTGGAGAGTTACCAACATGTTTGGGAAATTTGACTTCTCTTAGAAAGTTTGACTTAGGATCCAATAGGTTAACCTCTACAATACCTTCCTCATTTTGGACTCTCAAAGATGTTTTAGAGGTAAACTTATCCTCCAATGCTATAATTGGAGATCTTCCACCTATGATTAAGAATTTGAGAGCTCTTGTATCATTAGATTTGTCAAGAAATCAAATTTCAAGCAACATTCCATCAACCATAAGTTTCTTGACAACTTTAGAAACTTTGTCCTTAGCATATAACAAAATCAAAGGGCCTATTCCAAAATCACTTGGTGAAATGGTAGGCTTGAGTTTCTTGGACTTGTCTCAAAATCTTATAACCGGCGAGATCCCAAAATCCTTAGAGTCACTTTCTTATCTTAAATACATTAATCTTTCATACAATAGATTGCAAGGAGAGATTCCTAATGGAGGACCTTTCAAAAAATTCACATCTCAATCTTTCATGCATAATGAAGCACTTTGTGGTAGTCCTTACTTACTATTTCCTCTATGTGATAAACAAATTAGGAAAAAATCAAAGACAAAGATGATATTAATCACTTGCATATCTTCCTTAATTGTTGTGTTGGGAATTGCATGGATAATACTTCAAATGCATAAAAGGAAAAAAGTTGAAAAACCTCTTGAAAAGGATTTATCAACTAATTTAGGGCTTTTAAGAAGGCTTTCCTATTCTGAACTTGTGCAAGCAACTAATGGATTTAGTGAGAGTAATCTACTTGGAAGAGGTGGCTTTGGATCAGTGTATCAAGGAATGCTTTCTAGTGGAAAGATGGTAGCAATTAAAGTACTTGATTTGAAATTGGAAGCAACATCAAAAAGCTTTGATGCAGAATGCAATGCTATGCGTAATCTTCGACATCGAAATCTTGTTGAGATTATTACTAGTTGTTCAAATGTTAATTTTAAATCTTTGGTCATGGAGTTTATGTCAAATGGAAGCTTGGAAAAATGGTTATACTCAAATAACCATTGTTTAGGTTTCTTACAAAGGTTGAATATAATGATAGATGTGGCATCTGCATTGGAGTATCTTCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGTAATGTGCTACTAGATGAAAATATGGTTGCACATGTCGGGGATTTCGGAATTTCCAAGCTCTTGGATGAAGGACATTCTAAAGCTCATACTCAAACTTTAGCTACTATTGGCTATGTTGCACCAGAGTATGGATCTAAGGGAGTTGTTTCTGTTAAAGGAGATGTGTATAGCTATGGAATAATGCTAATGGAAATGTTCACAGGAAAGAAGCCAACAAATGAAATGTTTGCAGAAGAATTAACCTTGAAAATGTGGATTAGTGAATCGATGCATAATTCAATAATAGAAGTTGTGGATTGCAATTTAGTCTCACAACATGGGAAAGAAATTCAAGATATTTTAGTTCATGTATCATCTATTTTGGCTTTGGCATTGAGATGTTGTGAAGATTCGCCTGAGGCACGAGTTAGTATGACGAATGTAACTGCATCGTTGATGAAGATCAAGACCTTATTCATATAA 3648 0.3383 MAKLCSSYSNLLCILSVSLYYFFFTTCLAKSTKNITTDEFSLLAFKSSITLDPYHMLSNWSISTNSSSSSSFSSCNWVGVTCDEHHGRINALNLSNMGLEGTISPQLGNLSFLVFLDLQGNNFHGELPQELLQLHRLKWLDLSYNNFVGEIPLRIGDLSKLQYLDLGYNKIVGYIPQSISNLSMLEYLDWKSNLVKGTIPHVICQLGRLRILDVRNNKLSGIIPSTISNMSSLEEIHLSNNSLSGEIPKGIGDLTQLTILNLQNNLLFGNISSTILMFNNSSLQKLALGFNNLSGILPSNVCQGLPNLKLLYLYVNDFSGKMPNIWRFCKELEDLELSFNNFDKGHMPPDIGNLIKLQSLYLTSVNLEGEIPLSLFNISSLMEINLNGNNLYGTLPQEMCNQLPQLEIFTLFGNHFEGAIPRSIGNCTLLQSLTLQNNFFSGSIPMEIGNLNQLQLLQMGNNSLSGPIPSKIFNISTLEYLHLEQNSFTGMLPSNMGFGLPNLQQIHIYGNKLAGKIPNSISNASNLVIIDLSSNEFSGNIPNSFGNLRVLESLIIAGNNLTIDDSLEFDFLTSLTSCRYLKHLEVSKISFQSKLPKSIGNLTLEHFWANSCGINGNIPLEIGNMSNLIRLSLSHNDFRGSIPSTIKGLHKLQSLDLSYNGLQGSIVHELCEIRSLSELNLTNNKLFGELPTCLGNLTSLRKFDLGSNRLTSTIPSSFWTLKDVLEVNLSSNAIIGDLPPMIKNLRALVSLDLSRNQISSNIPSTISFLTTLETLSLAYNKIKGPIPKSLGEMVGLSFLDLSQNLITGEIPKSLESLSYLKYINLSYNRLQGEIPNGGPFKKFTSQSFMHNEALCGSPYLLFPLCDKQIRKKSKTKMILITCISSLIVVLGIAWIILQMHKRKKVEKPLEKDLSTNLGLLRRLSYSELVQATNGFSESNLLGRGGFGSVYQGMLSSGKMVAIKVLDLKLEATSKSFDAECNAMRNLRHRNLVEIITSCSNVNFKSLVMEFMSNGSLEKWLYSNNHCLGFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVGDFGISKLLDEGHSKAHTQTLATIGYVAPEYGSKGVVSVKGDVYSYGIMLMEMFTGKKPTNEMFAEELTLKMWISESMHNSIIEVVDCNLVSQHGKEIQDILVHVSSILALALRCCEDSPEARVSMTNVTASLMKIKTLFI* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2933 1215 Pfam Leucine Rich repeat 650 667 IPR001611 GO:0005515
Tpr7g2933 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 331 446 - -
Tpr7g2933 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 158 - -
Tpr7g2933 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 157 248 - -
Tpr7g2933 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 404 1214 - -
Tpr7g2933 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 208 343 - -
Tpr7g2933 1215 SUPERFAMILY L domain-like 62 396 - -
Tpr7g2933 1215 Pfam Leucine Rich Repeat 160 182 IPR001611 GO:0005515
Tpr7g2933 1215 Pfam Leucine Rich Repeat 526 548 IPR001611 GO:0005515
Tpr7g2933 1215 SMART LRR_sd22_2 254 273 - -
Tpr7g2933 1215 SMART LRR_sd22_2 500 526 - -
Tpr7g2933 1215 SMART LRR_sd22_2 769 790 - -
Tpr7g2933 1215 SMART LRR_sd22_2 158 184 - -
Tpr7g2933 1215 SMART LRR_sd22_2 206 232 - -
Tpr7g2933 1215 SMART LRR_sd22_2 697 718 - -
Tpr7g2933 1215 SMART LRR_sd22_2 745 764 - -
Tpr7g2933 1215 SMART LRR_sd22_2 793 819 - -
Tpr7g2933 1215 SMART LRR_sd22_2 649 681 - -
Tpr7g2933 1215 SMART LRR_sd22_2 451 477 - -
Tpr7g2933 1215 Pfam Leucine rich repeat N-terminal domain 37 83 IPR013210 -
Tpr7g2933 1215 SUPERFAMILY L domain-like 328 595 - -
Tpr7g2933 1215 Gene3D Transferase(Phosphotransferase) domain 1 1011 1213 - -
Tpr7g2933 1215 Gene3D Ribonuclease Inhibitor 278 566 IPR032675 -
Tpr7g2933 1215 Gene3D Ribonuclease Inhibitor 567 874 IPR032675 -
Tpr7g2933 1215 SUPERFAMILY Protein kinase-like (PK-like) 917 1207 IPR011009 -
Tpr7g2933 1215 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 157 248 - -
Tpr7g2933 1215 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 404 1214 - -
Tpr7g2933 1215 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 208 343 - -
Tpr7g2933 1215 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 14 158 - -
Tpr7g2933 1215 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 331 446 - -
Tpr7g2933 1215 SUPERFAMILY L domain-like 604 860 - -
Tpr7g2933 1215 ProSitePatterns Protein kinases ATP-binding region signature. 941 963 IPR017441 GO:0005524
Tpr7g2933 1215 Gene3D Ribonuclease Inhibitor 38 152 IPR032675 -
Tpr7g2933 1215 Gene3D Ribonuclease Inhibitor 204 277 IPR032675 -
Tpr7g2933 1215 Gene3D Ribonuclease Inhibitor 153 203 IPR032675 -
Tpr7g2933 1215 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1054 1066 IPR008271 GO:0004672|GO:0006468
Tpr7g2933 1215 Gene3D Phosphorylase Kinase; domain 1 917 1010 - -
Tpr7g2933 1215 SMART serkin_6 935 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2933 1215 Pfam Protein kinase domain 936 1204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2933 1215 SMART LRR_typ_2 451 475 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 793 817 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 281 304 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 500 524 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 403 427 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 649 673 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 378 402 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 206 229 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 110 134 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 230 254 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 745 769 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 625 648 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 305 328 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 697 721 IPR003591 -
Tpr7g2933 1215 SMART LRR_typ_2 158 182 IPR003591 -
Tpr7g2933 1215 ProSiteProfiles Protein kinase domain profile. 935 1215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2933 1215 Pfam Leucine rich repeat 699 758 IPR001611 GO:0005515
Tpr7g2933 1215 Pfam Leucine rich repeat 208 267 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2933 Tpr-Chr7 36600826 36608332 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2933 15 1211 Receptor kinase-like Gene Family AT5G46330 34.612 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr7g2933 Pkinase 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2933 - K13420 gmx:100784397 1233.78