Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2927 ATGGCCAAACCATACTCTTTGCTCTCTATTCTCTCTGCCTCACTCTATTATTACTTCTTCATCACTTGCTTAGCTAAAAGTACTAAAAACATCATCACCGATGAATTTGCACTCTTTGCATTCAAATCATCTATTACCTTAGACCCTTATCATATACTTAGTAATTGGTCAATCTCCTCTTCTAATTCTTTCTCTGCATGCAATTGGGTTGGTGTCACTTGTGATGAGCAACATGGAAGAGTAAGGAAATTGAATCTTGGTAACATGGGCCTTAAAGGTACCATTTCTCCTCATTTGGGAAATCTTTCTTTCCTTGTTGTTCTTGATCTAAATGGCAATAGTTTCCATGGTGAGTTACCACATGAGTTACTTCACTTGAAGAGATTGAAATTGTTGAATTTGAGCAACAATGGTTTTGTTGGAGAAATTCCATCAAGGATAGGGTTCTTATCCAAACTTCAATATTTGCATCTTGGCTATAATAATTTTGTTGGATTAATTCCACAATCTATATCCAATTTGTCAATGTTAGAGTATCTAAATTTGAACTCAAATTTCATCAAAGGAACCATTCCGAATGTTATTGGTCAACTTCGTCGGTTAAGGATTTTGCGTATCAGTAACATTAAGCCGTTGTCCGGAATCATACCAAAGACAATTTCCAACCTTTCTTCCCTTGAAGAAATCTACTTAAGAAATAACACCTTATCAGGAGAAATTCCGAAAGGAATCGGTGATCTTACATGGTTGAGAATTGTGAACCTTCAATATAATATGCTCACAGGCAACATATTTATGTTCAACAGCACATCATTGGAACACTTATACCTTGGTAATAATAATTTGAGTGGCATTCTTCCATCAAATGTTTGTCAAGGGCTTCCAAATCTTAGATCACTCTATCTTTTCTTTAATGATTTTTATGGTGAGATGCCAAAAGTTTGGCGTTATTGCAAAGAGTTGGAAGATTTGGAACTATCCAACAATAATTTTGACAAAGGACGTATGCCACATGACATTGGAAAATTGACCAAGCTTCGATATTTGTTTCTTCCCTTGACTAACTTGCATGGTTCGATACCAATGGAGATTGGCCATCTCAATCAACTCACATTTTTAGAATTGGGAAATAACAGTTTGAGTGGACCTATTCCTTCAAAAATCCTCAACATTTCAACATTGGAATCTTTAATTTTTGAACAAAATTCACTCTCAGGCATGCTTCCATCAAACATGGGATTTGGCCTTCCTAACCTACAACAATTACAGATGAATGGAAACAAATTTGTTGGAAAAATTCCAAATAGTATATCCAATGCTTCAAATCTAGTTACACTTGACTTGAGTCGTAACGAATTTAGTGGAATTATACCGAATTCTTTTGGACATTTAGCATTCATTGAATACCTCTTCATACACAACAATAATTTGACATTAAATGATGATTCACTTGAAATAAACTTCCTTACTTCACTTACTAGTTGCAGATATCTTGCAAATCTTGATGTATCAAATAATAGGTTATCAAAACTTCCCAAGCGCATTGGAAACTTATCATTAGAACACTTTTACGCAAATTCTGTTGGAATTAATGGATATATTCCACTAGAAATCGGAAACATGAGCAACCTCATTGAATTGTCTCTGAGTATGAATGATTTAAATGGATCCATTCCTAGTACAATTAAAAGGTCAAATCTTCAACTTTTGGATCTTGACTACAATGGACTGCAGGGATCAATAGTTCATGAGCTTTGTGAAGTTAGCAGTTTGAGTGAGTTGTATTTAACAAGCAATAAGCTTTCTGGTGTGTTACCAACATGTTTGGGAAATATGACTTCTCTTAGAAAGTTTCACATAGGATACAATAAGTTCACCTCATTAATACCTCTCTCTTTTTGGAATCTTGAAGATATTTTAGAGGTAAACTTATCCTCTAATGCTTTAATTGGAAATCTTCCACCTGAGATTAAGAATTTAAGAGCTCTTACACTATTAGATCTCTCCAAAAATCAAATTTCAAGCAACATTCCAACAGCCATAAGTTTATTGAGAACTTTAGAAACCCTCTCCTTAGCAAATAACAAATTGAATGGTCCTATTCCAACATCACTTGGTGAAATGTTTAGTTTGAGTTTCTTGGACTTGTCTCATAATCTTATAACTGGTGTGATTCCAAAATCATTAGAGTCAATTTCTTCTCTTAAATACATAAATCTATCATACAATAGATTACAAGGAGAGATTCCTGACGGAGGACCTTTCAAAAGCTTCACAGCTCAATCTTTCATGCATAATGATGCGCTTTGTGGCAATCCTCGCTTACAAGTGCCTCTATGTATGAAGAAGTCAAAGAAAAAGAAGCAACTGATCAAATTTGTATTGCCCATAATTGTTGTGTTATGCATTTTGGTTGTTGCATGCATAATAATTTGGAGGCATAAAAGGAAGAAGGTTGAAAATCCACTTAAAAGTGATTTGTCAGCTACTTTAGGGGCTCCAAGAAGAATATCCTACTATGAAGTTGTGAAAGCTACTAATGGATTTAGTGAAAGTAATTTACTTGGAAAGGGTGGCTTTGGATCTGTGTATCAAGGAATGCTTTCTAGTGGGAAGATGGTGGCAATTAAAGTACTTGACTTGACATTGGAAGCAACATCAAGAAGCTTTGATGCAGAATGTAATGCAATGCGCAACCTTCGGCATCGAAATCTTGTTCAAGTTATCAGTAGTTGTTCAAATGATGATTTCAAATCACTGGTGATGGAGTTTATGTCAAACGGAAGTGTGGAAAAATGGTTATACTCAGAGAACTATTGTTTGAATTTCTTGCAAAGGTTGAATATAATGATAGATGTGGCATCTGCATTGGAATATCTACATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGTAATGTGTTACTAGATGAAGATATGGTTGCGCATGTTAGCGATTTTGGAATTTCGAAGCTTTTGGATGAAGGACAATCTAAAACTCATACACAAACATTAGCTACTCTTGGTTATGTTGCACCAGAATATGGACCTAAGGGAGTCATTTCAGTTAAAGGAGATGTGTATAGTTATGGAATAATGCTGATGGAAATGTTCACCGCAAAGAAGCCAACAAATGAAATGTTTTCAGAAGAATTAACCTTGAAAACCTGGATTAGTGAATCAATGGTCAATTCAGTTATGGAAGTTGTGGATTACAATTTAGTCTCACAAAATGAAAAAGAACTTCATGAAATTTTTGCTTTAGCTTTGAGTTGCTGTGCAGATTCACCTGAGGCAAGAATTAAAATGACAGATGTAACTACATCGTTAATCAAAATCAAGACATTGGCCATGCGGTGA 3372 0.3496 MAKPYSLLSILSASLYYYFFITCLAKSTKNIITDEFALFAFKSSITLDPYHILSNWSISSSNSFSACNWVGVTCDEQHGRVRKLNLGNMGLKGTISPHLGNLSFLVVLDLNGNSFHGELPHELLHLKRLKLLNLSNNGFVGEIPSRIGFLSKLQYLHLGYNNFVGLIPQSISNLSMLEYLNLNSNFIKGTIPNVIGQLRRLRILRISNIKPLSGIIPKTISNLSSLEEIYLRNNTLSGEIPKGIGDLTWLRIVNLQYNMLTGNIFMFNSTSLEHLYLGNNNLSGILPSNVCQGLPNLRSLYLFFNDFYGEMPKVWRYCKELEDLELSNNNFDKGRMPHDIGKLTKLRYLFLPLTNLHGSIPMEIGHLNQLTFLELGNNSLSGPIPSKILNISTLESLIFEQNSLSGMLPSNMGFGLPNLQQLQMNGNKFVGKIPNSISNASNLVTLDLSRNEFSGIIPNSFGHLAFIEYLFIHNNNLTLNDDSLEINFLTSLTSCRYLANLDVSNNRLSKLPKRIGNLSLEHFYANSVGINGYIPLEIGNMSNLIELSLSMNDLNGSIPSTIKRSNLQLLDLDYNGLQGSIVHELCEVSSLSELYLTSNKLSGVLPTCLGNMTSLRKFHIGYNKFTSLIPLSFWNLEDILEVNLSSNALIGNLPPEIKNLRALTLLDLSKNQISSNIPTAISLLRTLETLSLANNKLNGPIPTSLGEMFSLSFLDLSHNLITGVIPKSLESISSLKYINLSYNRLQGEIPDGGPFKSFTAQSFMHNDALCGNPRLQVPLCMKKSKKKKQLIKFVLPIIVVLCILVVACIIIWRHKRKKVENPLKSDLSATLGAPRRISYYEVVKATNGFSESNLLGKGGFGSVYQGMLSSGKMVAIKVLDLTLEATSRSFDAECNAMRNLRHRNLVQVISSCSNDDFKSLVMEFMSNGSVEKWLYSENYCLNFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDEDMVAHVSDFGISKLLDEGQSKTHTQTLATLGYVAPEYGPKGVISVKGDVYSYGIMLMEMFTAKKPTNEMFSEELTLKTWISESMVNSVMEVVDYNLVSQNEKELHEIFALALSCCADSPEARIKMTDVTTSLIKIKTLAMR* 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2927 1123 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 212 331 - -
Tpr7g2927 1123 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 318 1119 - -
Tpr7g2927 1123 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 151 229 - -
Tpr7g2927 1123 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 152 - -
Tpr7g2927 1123 Gene3D Ribonuclease Inhibitor 149 215 IPR032675 -
Tpr7g2927 1123 SUPERFAMILY Protein kinase-like (PK-like) 830 1114 IPR011009 -
Tpr7g2927 1123 ProSiteProfiles Leucine-rich repeat profile. 271 292 IPR001611 GO:0005515
Tpr7g2927 1123 SMART LRR_typ_2 588 611 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 294 317 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 223 247 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 489 518 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 660 684 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 441 463 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 270 293 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 541 565 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 174 198 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 708 731 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 102 126 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 612 635 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 416 440 IPR003591 -
Tpr7g2927 1123 SMART LRR_typ_2 150 173 IPR003591 -
Tpr7g2927 1123 ProSitePatterns Protein kinases ATP-binding region signature. 855 877 IPR017441 GO:0005524
Tpr7g2927 1123 Pfam Leucine rich repeat 152 208 IPR001611 GO:0005515
Tpr7g2927 1123 Pfam Leucine rich repeat 590 649 IPR001611 GO:0005515
Tpr7g2927 1123 Pfam Leucine rich repeat 685 745 IPR001611 GO:0005515
Tpr7g2927 1123 Gene3D Ribonuclease Inhibitor 34 148 IPR032675 -
Tpr7g2927 1123 SUPERFAMILY RNI-like 375 750 - -
Tpr7g2927 1123 SUPERFAMILY RNI-like 83 406 - -
Tpr7g2927 1123 SMART serkin_6 849 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2927 1123 Pfam Protein kinase domain 850 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2927 1123 Gene3D Ribonuclease Inhibitor 216 483 IPR032675 -
Tpr7g2927 1123 Gene3D Ribonuclease Inhibitor 484 789 IPR032675 -
Tpr7g2927 1123 Pfam Leucine Rich Repeat 442 464 IPR001611 GO:0005515
Tpr7g2927 1123 Pfam Leucine Rich Repeat 271 290 IPR001611 GO:0005515
Tpr7g2927 1123 Gene3D Phosphorylase Kinase; domain 1 832 924 - -
Tpr7g2927 1123 Gene3D Transferase(Phosphotransferase) domain 1 925 1122 - -
Tpr7g2927 1123 SMART LRR_sd22_2 660 679 - -
Tpr7g2927 1123 SMART LRR_sd22_2 612 633 - -
Tpr7g2927 1123 SMART LRR_sd22_2 269 296 - -
Tpr7g2927 1123 SMART LRR_sd22_2 708 734 - -
Tpr7g2927 1123 SMART LRR_sd22_2 150 176 - -
Tpr7g2927 1123 SMART LRR_sd22_2 367 393 - -
Tpr7g2927 1123 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Tpr7g2927 1123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 968 980 IPR008271 GO:0004672|GO:0006468
Tpr7g2927 1123 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 151 229 - -
Tpr7g2927 1123 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 318 1119 - -
Tpr7g2927 1123 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 14 152 - -
Tpr7g2927 1123 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 212 331 - -
Tpr7g2927 1123 ProSiteProfiles Protein kinase domain profile. 849 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2927 Tpr-Chr7 36512710 36525050 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2927 517 769 Receptor kinase-like Gene Family AT3G47570 32.422 1.95e-23 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr7g2927 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2927 - K13420 mtr:MTR_8g465340 1234.17