Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2920 ATGAAGAGTTGTGAAGAATGGAAACCTTTTATGATAATGATAGCAATTGATGTTTCTTTTGCTGTTGTGAATATTCTTCTCAAGAAAGTCCTTGATGAAGGAATGAACCATTTGGTTTTTATTACATACCGTCTTTCTATTGCTACTATTTTCGTCGGCTCAATCGGTTACTTTAGAGAAAGAAATAGTAGACCGCCGCTCACATTTCGAATTTTATGCTACCTCTTCTTCAGTGCCATTGTTGGAGCATCAGTTACACAATACTTCTTCCTCCTAGGGATTCAATATACTTCTGCTACATTTGCTTGTGCCTTTGTCAACATGGTGCCTGTGATCACTTTCCTATTGGCATTGCCATTTGGATTAGAGACAGTGAACATCAAATGCAACAGTGGAAGAGCCAAGATTCTTGGTACATTGGTCTGTATACTTGGTGCATTGATGTTAACACTTTACAAAGGAAAGGGTCTGTTTAATTTTTCTCACCATCAATCTTCAGTGAAGTTAACATCTACTAGAACATCAGAAAAATGGACTATTGGTGTAATAGCTTTGATTTTGGGAACTCTATTTTGGTCTTCTTGGTTCATTTTACAATCTAAAATAAGCAAAAGATATCCATGTCAGTATTCTAGCACAGCAATCATGAGCTTCTTTGGTGCCATTCAATCTGCTGTCATTTGCTTCTTCATTGACCATAACTTGTCAATATGGGTTCTCAGAGGAAATATACAAATAATTGCAATTTTGTATGCTGGAATAATTGGATCAGGATTGTGTTTTGTTGGTATGTCATGGTGTGTGAAGAAGAGGGGTCCAGTCTTTACTGCAGCATTTAGCCCTTTTGTTCAAATAATGGCTGCCATGATTGATATCCCTGTCTTACATGAACAGCTCTATCTTGGAAATGTGATGGGATCGATCTTGGTGATGATTGGATTATACATTCTTCTATGGGGTAAGAACAAAGAGATGAAGAATCGTTTGATTAAGTTAGGAGAGGAAGCTGAAAAAAACAAGGAACAAGAGCCACAACAACCTCAAATACAACACTTGACTGTGTCTTGTGAATCAAGGTGTCAATAA 1086 0.3711 MKSCEEWKPFMIMIAIDVSFAVVNILLKKVLDEGMNHLVFITYRLSIATIFVGSIGYFRERNSRPPLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVITFLLALPFGLETVNIKCNSGRAKILGTLVCILGALMLTLYKGKGLFNFSHHQSSVKLTSTRTSEKWTIGVIALILGTLFWSSWFILQSKISKRYPCQYSSTAIMSFFGAIQSAVICFFIDHNLSIWVLRGNIQIIAILYAGIIGSGLCFVGMSWCVKKRGPVFTAAFSPFVQIMAAMIDIPVLHEQLYLGNVMGSILVMIGLYILLWGKNKEMKNRLIKLGEEAEKNKEQEPQQPQIQHLTVSCESRCQ* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2920 361 PANTHER WAT1-RELATED PROTEIN 9 340 IPR030184 GO:0016021|GO:0022857
Tpr7g2920 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 154 - -
Tpr7g2920 361 Pfam EamA-like transporter family 180 318 IPR000620 GO:0016020|GO:0016021
Tpr7g2920 361 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020|GO:0016021
Tpr7g2920 361 PANTHER WAT1-RELATED PROTEIN 9 340 - -
Tpr7g2920 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 323 - -
Tpr7g2920 361 Coils Coil 322 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2920 Tpr-Chr7 36469427 36473067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2920 7 252 Nodulin-like Gene Family AT3G30340 51.587 2.06e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2920 - - gmx:100803670 585.104