Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2918 ATGGTAGCACCGATAACTGATAACGGAATCCGTAGCAGAAAGAAGTCATCAAGAGGTCACCATAGGTTTGTGGGAGTTCGACAAAGGCCGTCAGGAAGATGGGTGGCAGAGATCAAAGACTCATTACAGAAAGTAAGGCTTTGGCTTGGAACATTCGACACAGCTGAAGAAGCCGCTCGTGCTTATGACACTGCTGCTAGAGCTTTGAGAGGTGCTAATGCTAGAACCAACTTTGATTTGCCAGAATCCGGAACCAATGGTGGCGTTGGGGCTAAGCGCGGTTCTGGTTCCAACTTCATGCTAGAGAATACTGAGCCTTTTTCTTTTGAAGATGTTAGTGACTCGGGTTCAGGTTCAGAACATGGCCTTCTTGGTGCACTTAAGGCAAAACTTTTCGATGGAAAAGAAGCGAAATTTTCATTTTCATTTCCTTCTGTTAGCGCGGTTTCAAAATCAACTCAGAATTGTTCTGAAAAGAAACAATCATCAGCTACTTATTGCCTATCTCAGATGAATGAAACTCATATCAATACTATGCATAGTTCATTGAGTACTTCATCAAACACTTTCGCCAAAAGTGTTGTTATTCCAAATCATGATCATGAAATTTGTCAAACACCATCTTTGACAAACATGTTATGGTCTAATGAATTGGAATTTGAATTACCTTGGCCTAATCAAAGTCATGTTCATCATGATGACAATAGTACTAATCTTTTTGCATCTGCAAGTGCATCAAATTTTTCATGGCCACTAATAGAGTCCAATGTTAACATGACATGTATAGATCAAGGGCTATTAAATAGTAACAGAAATGATCAAATAAATATGATGAGTATGCAGTTACCTCAAGTTGGTGGAGCAAATGAAGGATTTTGGACATTGGATCAGCAGCAACAATTTGTGCAATGTGAAGAGAATAATAGTTGGTTTGGTTCTGCTGGATCTTGGGATCCTCTTATCTATGTGCCCTCTGAGTTAGCTTGA 987 0.3972 MVAPITDNGIRSRKKSSRGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEEAARAYDTAARALRGANARTNFDLPESGTNGGVGAKRGSGSNFMLENTEPFSFEDVSDSGSGSEHGLLGALKAKLFDGKEAKFSFSFPSVSAVSKSTQNCSEKKQSSATYCLSQMNETHINTMHSSLSTSSNTFAKSVVIPNHDHEICQTPSLTNMLWSNELEFELPWPNQSHVHHDDNSTNLFASASASNFSWPLIESNVNMTCIDQGLLNSNRNDQINMMSMQLPQVGGANEGFWTLDQQQQFVQCEENNSWFGSAGSWDPLIYVPSELA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2918 328 SUPERFAMILY DNA-binding domain 23 79 IPR016177 GO:0003677
Tpr7g2918 328 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Tpr7g2918 328 MobiDBLite consensus disorder prediction 1 25 - -
Tpr7g2918 328 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Tpr7g2918 328 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 149 - -
Tpr7g2918 328 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 200 323 - -
Tpr7g2918 328 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
Tpr7g2918 328 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Tpr7g2918 328 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Tpr7g2918 328 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Tpr7g2918 328 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Tpr7g2918 328 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 200 323 - -
Tpr7g2918 328 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 3 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2918 Tpr-Chr7 36459978 36461686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2918 11 78 AP2-EREBP Transcription Factor Family AT5G19790 69.118 1.24e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g2918 AP2 9.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2918 - - mtr:MTR_2g016730 512.301