Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2910 ATGACTAGGGCTATTCGGAATAGGGTACTCAAAGATGCAAATGGTGATATTAGTGACCATCTACGCAACCACATCCATTTAACAAATTGTATTCACTTGAAGAATCATATGCATAAAAACAGTCCAATACTCGCTGATAGGTCTATTATGAGAGACCTTGTTGTGCTGCAAAGATCTCGTTCACTTCGGGATCCTTCTGCGAGTCCTCCGTCATGGCACTCTCCTTCTGTAGTTGACTTGCTTTTCAAAAGATCTGAAAACGATGCCGTGATTCAAGGGGGTAGAAGGTCTGTTGGTAATGACAGTAAGAAGGGAGGTAGGAGATTGTCTGGAATTGGAAACTCGCCACCATTGGCTAGTAAAGGTACATCGAGAGTTGCTCCTGGTGAGGCTAGTAGGGGTTTTGATGTGGTACCGGCGGCAACTAGTGAACGAAGTAGCAGGAGCGGAATGGGGGATAGGAGGAGAGTTGGGAGAGAAGAATCTGGAAGGAAGAGTAATAGGCCTGACTATTTGGAAGTTATTAGTCAAGAGCAACTTCTTCATGAGGCGGGCAAAAGTTTGGCCGAAGATGTTGTTTCGAGGCATTCTCAATCGATAGATAGAAAGAGTAGACAGAGGGGGAAGAATGTTCGAGACGTTCCAGTTAAGACTCTTTCTGAACAGCTGAATGATGTTCCTTTGGATAGTGATGATTTAGCATCATCTAACATTCATTTTCGGGCAAGGTTTCCACGACAGGAGAAAATTATTGAGGAGGCACAACAAGCCAGCATGCGCGGTCATGGTAATGGATTGAATAGGGTAAAAAGGCGTAAATTTCGAAGTGTAAGAAGAGCTCGGGTTGCTACAACGTCAAGAGACATTGGAGCTGAGAATGAAATGTCAGTGGCTTCCAACTCATTAGCTCAGGGTTCGGCTCACGAGAAATATCACTCGGAAGAGGTTGATGAGTATGCAGGAGATAATGTTACCAGGGCTCCAAAAAATGGGTGTGGCATGCCTTGGAATTGGTCCAGAATTCATCACAGAGGTAAAACATTCCTTGACATTGCTGGAAGAAGTTTATCTTGTGGCTTATCTGACTCGAGGTTAAAGAAAGGGACATCATTAACTTCCAATGGAAGAAATGTTTCTGCGATGCCTTTGGCAGCTGACTGTTCTAGCTCATGTACTAACTCTGAGGCAGAGGCACTGCCTTTACTAGTTGATGCATCTGGATCTCATGGAAGCTCCGATAATGCTTGCTGGGGCCGTGATTATGCGGGTGAACTAGGTATTTACGGTGATAATTTATTCAAGCAAGATATTGATTCGGATCTTGCTTCTGAAGCTAGATCTGGTGGCCAACATAACTTGAGACGGAATCATCATAGTAGACACCAAAGTTTAACACAAAAATATATACCACGAACCTTCAGAGATATGGTTGGACAGAATTTAGTGGCGCAAGCTCTTTCGAATGCAGTGACTAGACGGAAAGTTGGATTGCTGTATGTGTTTTATGGTCCTCATGGCACCGGAAAAACTTCCTGTGCTCGCATATTTGCCAGAGCTTTGAATTGTAGTTCGTCGGAACACCCAAAACCTTGTGGCTTTTGCAATTATTGCATAGCACATGATATGGGAAAGAGTAGAAGTATAAGGGAAGTTGGTCCAGTCAGTAATTTTGACTTTGAGAACATCATGGATATACTCGATAATATGATTATTTCTCAGCTTCCGTCACAGTACAGAGTGTTTATTTTTGACGATTGTGATACTCTGTCAGTAGATTGTTGGAATGCTATATCCAAGGTCATTGATCGAGCACCTAGACGAGTGGTTTTTATCCTTGTTAGTACTAGTCTTGATGTCTTGCCTCATATAATAATATCCAGGTGTCAAAAATTCTTTTTCCCAAAGTTAAAGGATTCAGATATCGTATATACACTGGAGCGGATTGCAACCAAAGAAGGGCTAGATATTGATAAGGATGCCTTAAAACTCATTGCATCAAGGTCTGACGGATCATTGAGGGACGCTGAGATGACACTTGAACAACTTAGTTTGCTTGGGCAGAGAATTTCTGTTCCTCTTGTTCAAGAGCTAGTAGGGCTTATATCTGATGAGAAGTTAGTGGATCTACTTGACTTGGCATTATCTGCGGACACGGTAAATACTGTGAAGAATTTGAGAGTGATAATGGAAGCAGGTGTTGAACCATTAGCTTTGATGTCACAGCTTGCTACAGTAATTACTGATATACTTGCTGGGACCTATGATTTCACTAAAGAAAGACGTAGAAGGAAATTCTTCCGAAGACAACCATTGTTCAAAGAAGACATGGAAAAGCTTCGCCAAGCTCTGAAAACTTTATCTGAGGCGGAGAAGCAGTTAAGGATGTCCAATGACAAGCTAACATGGTTAACAGCTGCGTTGCTTCAACTTGCTCCTGATCAGCAATATGGGTTGCCTACTTCATCTGATAATAGTTTCAACCATAGTCCCTTCGCTCTAAATAATGGAAATATAAAAGAAGCTACGAGAAACACCGGTAATCCTGTTGAAATTCCTAACAGAACAAGGAGAATGTCAATGGATGCTCGAATGGAAAATTCTCATGCTGGAAGTTCAGCAGATAGAAGGCATAGTGTGTCTGGTTTTGCTCCTCAGCATACTTGTTCACATTCCACCGATAAGACTAGGATAAATGAAAGGCAGACTTCGGATAGAAACCGCAAAGAAATTGAAGAGATATGGTTAGAGGTGCTAGAGAGAATTCACTATCCTGGTCTCAAAGAGTTTTTGTATAAAGCAGGAAACCTAATCTTCATTAGTTTCGGGGCAGCTCCAACTGTGCAGCTAATGTTTAACTCTCAACTTTCCAAATCTACTGCTGAGAAGTTCACTGCTCACATCTTACATGCATTTGAATCAGTCCTTGGATCTTCTGTAGCCATAGAAATAAGATGTGAATCAAATAAAGATGGAGGCTCTCCTGTTCAACTGCCTCTTGTATTGCCTTCTGTCAATGACGGTTCATCTCAGATGAGAGACTTAAATGACGTTGGCACTGAAAAGAGAAGGAGTGAAATTGTAGAAGAAGAAGAAGAAGCTTCTCATATGGAGCATAAGCATAATGAGCAGCAGGTTGATGCTCACGCAACATATAGAAGTCTAGAAGGTACAAGTACGGGACAAGTGTCAGCTTCCCAAAAAATACCGATTGTTAAGTCACATTCAGACCGAAGAAAGCTTAGTGAGCTAAGTCAAAGTCGAAGTCTTGTAAAAAGTAAGGTATCTCTTGCTCATGTAATCCAGCAGGCAGAAGGTCAGCGAAGTGGGTGGTCAAAACGCAAAGCGGTTTCTATTGCTGAAAAGCTTGAACAAGAGAATCTGAGACTGGAGCCAAGATCAAGGAGTTTACTATGCTGGAAATCATCTAGAGCGACACGTCGGAAGCGGTCGCACTTGAAAATCCAAAACCGAAAGACACGAGCATTGCTGAACCTTGTCTCGTGTGGGAAATGTCTCTCCACAAAATCTCCGAGGTAG 3537 0.4224 MTRAIRNRVLKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSIMRDLVVLQRSRSLRDPSASPPSWHSPSVVDLLFKRSENDAVIQGGRRSVGNDSKKGGRRLSGIGNSPPLASKGTSRVAPGEASRGFDVVPAATSERSSRSGMGDRRRVGREESGRKSNRPDYLEVISQEQLLHEAGKSLAEDVVSRHSQSIDRKSRQRGKNVRDVPVKTLSEQLNDVPLDSDDLASSNIHFRARFPRQEKIIEEAQQASMRGHGNGLNRVKRRKFRSVRRARVATTSRDIGAENEMSVASNSLAQGSAHEKYHSEEVDEYAGDNVTRAPKNGCGMPWNWSRIHHRGKTFLDIAGRSLSCGLSDSRLKKGTSLTSNGRNVSAMPLAADCSSSCTNSEAEALPLLVDASGSHGSSDNACWGRDYAGELGIYGDNLFKQDIDSDLASEARSGGQHNLRRNHHSRHQSLTQKYIPRTFRDMVGQNLVAQALSNAVTRRKVGLLYVFYGPHGTGKTSCARIFARALNCSSSEHPKPCGFCNYCIAHDMGKSRSIREVGPVSNFDFENIMDILDNMIISQLPSQYRVFIFDDCDTLSVDCWNAISKVIDRAPRRVVFILVSTSLDVLPHIIISRCQKFFFPKLKDSDIVYTLERIATKEGLDIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMEAGVEPLALMSQLATVITDILAGTYDFTKERRRRKFFRRQPLFKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYGLPTSSDNSFNHSPFALNNGNIKEATRNTGNPVEIPNRTRRMSMDARMENSHAGSSADRRHSVSGFAPQHTCSHSTDKTRINERQTSDRNRKEIEEIWLEVLERIHYPGLKEFLYKAGNLIFISFGAAPTVQLMFNSQLSKSTAEKFTAHILHAFESVLGSSVAIEIRCESNKDGGSPVQLPLVLPSVNDGSSQMRDLNDVGTEKRRSEIVEEEEEASHMEHKHNEQQVDAHATYRSLEGTSTGQVSASQKIPIVKSHSDRRKLSELSQSRSLVKSKVSLAHVIQQAEGQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKSSRATRRKRSHLKIQNRKTRALLNLVSCGKCLSTKSPR* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2910 1178 CDD AAA 477 636 - -
Tpr7g2910 1178 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 462 810 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Tpr7g2910 1178 Coils Coil 772 799 - -
Tpr7g2910 1178 PANTHER PROTEIN STICHEL-LIKE 3 185 1145 - -
Tpr7g2910 1178 Pfam DNA polymerase III, delta subunit 479 636 - -
Tpr7g2910 1178 Pfam DNA polymerase III subunits gamma and tau domain III 692 750 IPR022754 GO:0003887
Tpr7g2910 1178 MobiDBLite consensus disorder prediction 91 171 - -
Tpr7g2910 1178 MobiDBLite consensus disorder prediction 188 212 - -
Tpr7g2910 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 683 IPR027417 -
Tpr7g2910 1178 CDD HLD_clamp_pol_III_gamma_tau 636 699 IPR045085 -
Tpr7g2910 1178 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 185 1145 - -
Tpr7g2910 1178 MobiDBLite consensus disorder prediction 865 903 - -
Tpr7g2910 1178 MobiDBLite consensus disorder prediction 148 168 - -
Tpr7g2910 1178 Gene3D - 637 699 - -
Tpr7g2910 1178 SUPERFAMILY post-AAA+ oligomerization domain-like 707 810 IPR008921 GO:0003677|GO:0006260
Tpr7g2910 1178 SMART AAA_5 495 636 IPR003593 -
Tpr7g2910 1178 Gene3D - 454 633 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2910 Tpr-Chr7 36372382 36378758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2910 462 760 Core DNA Replication Machinery Family AT1G21690 23.920 5.05e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2910 - - gmx:100809005 1830.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2910 7 36372382 36378758 Tpr7g2910 7 36372382 36378758 ECH