Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2897 ATGGTTGGTGATTCAGAAAGCAATGAAATTCATCATGAGGTGGTTTTAGATGTAAATGATGATGCCTCAAAAAATTGTGATGAAGAGTCAGGGATCAAAGACTCTGTGCCCCTTATAAAGAAGTTGGTAGCGGAAGTGGTGGGAACATACTTGATGATATTTGCTGGTTGTGCTGCTGTTAATGTGAACTTAAACAATGATCATGTAGTGACACTTCCTGGAATTGCATTTACTTGGGGATTCACAGTTATGGTATTGATTTATTCTGTTGGTCACATTTCTGGTGCTCATTTCAACCCTGCTGTTACCATTGCTCATGCTTCCACTAAAATATTTCCCCTCAAACAGGTACCAGCTTATATTATAGCTCAAATTGTTGGATCCATATTAGCAAGTGGAACCCTTAGACTTATATTTAATGGTGAAGATGATCATTTTATTGGAACACTTCCAGCTGGTTCTAACCTGCAAGCTTTTGTAATTGAGTTCATATGCACTTTCTTCCTTATGTTTGTTATTACTGGAGTGGCCACTGATAACAGAGCGATTGGTGAATTAGCAGGGCTTGCAGTTGGGTCTACAATAATAGTAGATATATTGTTTGCAGGACCAATGACAGGAGCATCAATGAATCCTGCAAGGAGTTTAGGACCTGCTATCTTGTACCATGAATATACAGGATTATGGATATATTTGATTTCACCAACTCTAGGAGCTTTGGTAGCTACATGGACTTACAATTTCATCAAACACACCAACAAGTCAACGCATGATGAGCTCACCAAGATTGAGCTCACCAGGATTGTCCCCTCCTTCGGCAAGAGCAGGTCTGTTGTATGTAAAATGTTATAA 852 0.392 MVGDSESNEIHHEVVLDVNDDASKNCDEESGIKDSVPLIKKLVAEVVGTYLMIFAGCAAVNVNLNNDHVVTLPGIAFTWGFTVMVLIYSVGHISGAHFNPAVTIAHASTKIFPLKQVPAYIIAQIVGSILASGTLRLIFNGEDDHFIGTLPAGSNLQAFVIEFICTFFLMFVITGVATDNRAIGELAGLAVGSTIIVDILFAGPMTGASMNPARSLGPAILYHEYTGLWIYLISPTLGALVATWTYNFIKHTNKSTHDELTKIELTRIVPSFGKSRSVVCKML* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2897 283 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g2897 283 PRINTS Major intrinsic protein family signature 79 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g2897 283 PRINTS Major intrinsic protein family signature 116 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g2897 283 PRINTS Major intrinsic protein family signature 161 179 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g2897 283 PRINTS Major intrinsic protein family signature 192 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g2897 283 PRINTS Major intrinsic protein family signature 229 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g2897 283 CDD MIP 40 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g2897 283 PANTHER AQUAPORIN NIP2-1 4 262 IPR034294 -
Tpr7g2897 283 Coils Coil 280 283 - -
Tpr7g2897 283 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 4 262 - -
Tpr7g2897 283 SUPERFAMILY Aquaporin-like 36 256 IPR023271 -
Tpr7g2897 283 Pfam Major intrinsic protein 35 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g2897 283 ProSitePatterns MIP family signature. 97 105 IPR022357 -
Tpr7g2897 283 Gene3D Glycerol uptake facilitator protein. 3 262 IPR023271 -
Tpr7g2897 283 TIGRFAM MIP: MIP family channel proteins 44 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2897 Tpr-Chr7 36267353 36269568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2897 4 262 Major Intrinsic Protein MIP AT5G37810 51.894 1.25e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2897 K09874 - gmx:100812577 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1127 3 10259631 10262328 Tpr7g2897 7 36267353 36269568 PCT