Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2871 ATGGCTGTAGAAGATACCCCAAAATCCATCATCACCGACGATCAAATCCCACCAAACCCTAACAACGAAGAAATCAACAACAACGATCTCGAAGATGGTGAGATCCTCGAAGAAGGAGACGATTCCTCCGCCACTTCCAAACCCAATTCCGCCGCTCTTCATCCTCTCGAGAATTCTTGGACTTTCTGGTTCGATAACCCTCAAGCTAAATCCAAACAAGCTGCTTGGGGTAGCTCTATTCGACCCGTCTACACTTTCTCTACTGTTGAAGAGTTTTGGAGCATTTACAATAACATTCATCATCCTAGCAAGTTGGCTTTTGGAGCTGATTTTCATTGCTTCAAGCATAAGATTGAACCAAAATGGGAGGATCCTATTTGTGCTAATGGTGGAAAATGGACTGTGCAGTTTTCAAGGGGAAAATCTGATACCAGTTGGTTGTATACGTTGTTGGCAATGATTGGAGAACAATTTGATCATGGAGATGAAATTTGTGGAGCAGTTGTGAATGTCAGGAGGGTGGATAAAATTTCTATTTGGACTAAGAATGCTACAAATGAAGCTGCTCAGGTGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTATAATGAAACCATTGGCTTTATATTTCATGATGATGCGAAGAAGCATGACAGAAGTGCTAAAAATAAATATGTTGTATGA 687 0.409 MAVEDTPKSIITDDQIPPNPNNEEINNNDLEDGEILEEGDDSSATSKPNSAALHPLENSWTFWFDNPQAKSKQAAWGSSIRPVYTFSTVEEFWSIYNNIHHPSKLAFGADFHCFKHKIEPKWEDPICANGGKWTVQFSRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRRVDKISIWTKNATNEAAQVSIGKQWKEFLDYNETIGFIFHDDAKKHDRSAKNKYVV* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2871 228 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 228 - -
Tpr7g2871 228 ProSitePatterns Eukaryotic initiation factor 4E signature. 110 133 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Tpr7g2871 228 Pfam Eukaryotic initiation factor 4E 55 206 IPR001040 GO:0003723|GO:0003743|GO:0006413
Tpr7g2871 228 MobiDBLite consensus disorder prediction 1 49 - -
Tpr7g2871 228 SUPERFAMILY eIF4e-like 28 224 IPR023398 -
Tpr7g2871 228 MobiDBLite consensus disorder prediction 12 26 - -
Tpr7g2871 228 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 228 IPR001040 GO:0003723|GO:0003743|GO:0006413
Tpr7g2871 228 Gene3D RNA Cap, Translation Initiation Factor Eif4e 46 228 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2871 Tpr-Chr7 36044504 36046731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2871 1 228 Eukaryotic Initiation Factors Gene Family AT4G18040 66.116 7.86e-112 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2871 K03259 - gmx:100793288 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2871 7 36044504 36046731 Tpr7g2871 7 36044504 36046731 ECH