Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2858 ATGGCACAAACTACAGAGGAAAAATATGATGAAAAAGTTCCATTCTACAAGCTCTTCAGTTTTGCTGATAAACTTGATGTAACATTGATGATTATTGGTGTCATTTGTGCCGTGGCTAATGGTTTGTCTCGACCTCTCATGGCACTCATTTTTGGGAAACTCATCAACACCTTTGGCTCAACCGGTCCATCAAACATTGTCCATGAAGTGTCTAAGGTCGCGTTATTATTTGTTTACCTTGGTATTGGCTGTGGAATAGCATTATTTCTACAGGTAACATGTTGGATGGTGACAGGAGAAAGACAAGCCACACGAATTCGTGGCTTGTACTTGAAAACTATATTAAAGCAAGAAATTTCTTACTTTGATACTGAAGCAACAAGTGGAGAAGTTATTGGAAGAATGTCTGAAAATACCATTCTCATTCAAGATGCCATATCAGAAAAGGTTGGGAAGTTTATACAAATTATTTCATATTTTTTGGGTGGATATGTGATTGCCTTTACAAAAGGGTGGGAACTCAGTCTTGTTTTACTCGCATGCGTTCCTTGTTTTATCATTATTGGTGGATTTATGTCAATGATGATGGCGAGAATGTCAATTCGTGGACAAATTGCTTATTCAGAAGCTGGAGCTGTTGTAGAACAAACAGTTGGAGCCATTAGAACAGTAGCTTCTTTTACTGGTGAGGAAAAAGCAATTGAGAAGTACCATAAGAAGTTAAAAATTGCTTATTATAGTACAGTTCAACAAGGGTTAGCATCAGGGACAGGAATGGGATTACTTTTGCTTATTGTGATTGGCACCAATGCACTTGCTATGTGGTATGGTTCCAAATTGATCATTGCGAAAGGATATAATGGTGGACATGTCTTCAATATAATCATATCAATTAATACTGGTGGAATATTAATGTCCCTTGGTCAAGCAACACCAATCCTAAATGCATTTACAACTGGCAAAGTAGCAGCATATAAGATGTTTGAGACAATTAAAAGAAAACCAAAAATTGATGCATATGACACAAGTGGTACTGTCTTGGAAAACATAAAGGGAGATATTGAACTCAAGGATGTTTACTTTAGATACCCTACAAGACCAGATGTGCATATATTTTCTGGATTCTCATTCTATATTCCAAGTGGCACAACTGCTGCTTTTGTTGGTCAAAGTGGTAGTGGAAAGTCAACTATAATTAATTTATTAGAAAGATTCTATGATCCTGAAGCTGGAGAAGTGCTTATAGATGATGTCAACTTGAAGAATTTTCAAGTTAGATGGATAAGAGAACAGATTGGGCTTGTTTGTCAAGAACCTGTCTTGTTTACCGCTAGTATCAAGGAGAACATAGCATACGGGAAAGAAGGTGCAAGTGACGAGGAGATAACAACGGCAATAACACTTGCCAATGCCAAAATATTCATTGATCAACTCCCTCAGGGTCTTGATACAATGGTAGGTCATGGAACTCAACTTTCTGGTGGACAAATACAAAGAATTGCAATTGCAAGGGCAATATTGAAGAATCCAAGAATTCTTCTTCTTGATGAAGCTACTAGTGCATTGGATGCTGAGTCTGAAAGTGTTGTTCAAGAAGCATTGGAAAAAGTAATGTCACAAAAGACCACCGTAGTTGTTGCACATCGTTTAATAACTATTAGAAATGCTGACATCATAGCAGTGGTTCATCAGGGAAAAATTGTGGAAAAAGGCATTCATGATGAGTTAATCAAGGATCCTTTTGGTGCTTATTCTCAGCTTATTAGTCTACAAGAAGGATCCGAGGAAGCAAAAGAAAGCCATAATTCTGAAACAGACGAGTCGAAGAACAGTTTCAATTTAGATAGTCATGTGACTAGAACATCCTTTGCAAAATCAATAAGCCAAGGTTCATCTAGAACTAATGATGATGTTGAAAGTAGTGAACTTGATAACGTGAAGGGCCAAAAAGTTTCTATTAAACGTTTGGCAAAGTTGAATAAGCCCGAGGTTCCTGTCTTACTACTTGGATCCATAGCGGCAGCAGTACATGGTGTTATTTTTCCTATGGCTGCCCTATTTCTTTCATTAGCTGTTAATACTTTCTATGAACCTCCTGAGAAACTTAGAAAAGATTCTGAGTTTTGGTCACTTTTATCTCTTGGTTTGGGTTTTATAACTCTAGTGGCTATACCAGTGCAGAACTACTTATTTGGAATTGCTGGTGGAAAACTTATAGAAAGAATTCGATCATTGACATTTAATAAGGTCGTGCACCAAGAAATCAGTTGGTTTGACCACCCTTCAAATTCAAGTGAGGCAGTTTGTGCAAGGTTAGCTACTGATGCTTCAACTGTGAGAAATCTTGTCGGTGACACATTAGCCCTCATGGTGCAAAACATAGCAACAGTTACAGCGGGACTAGTTTTAGCATTTACTGCTAATTGGATTCTATCTTTTGTGGTTCTATCCGTGTCATCATTGTTGCTCATACACGAATACATTAAAACCAAGTTTCTAAAAGGATTCAGTGCAGAGGCAAAGGTGAAGTATGAAGAGGCAAGTAAAGTGGCAAATGATGCTGTTGGGAGCATCAGAACCGTTGCATCATTTTGTGCGGAAGAAAAAATGATGGAAATGTACCAGAAAAAATGTTCAGCTCCAGAAAAACAAGGTGTTAGGTTAGGGCTTATTAGTGGTATAGGATTAGGTTTCTCTTACTTTGCTCTATACTGCACAATTGCTTTCTATTTCTACGTAGGATCCATTCTTGTGCACCACGGGAAAGCAACTTTTGGAGAGGTTTTCAAGGTTTACTTTTGTTTAACAGTTACAGTAGTAAGTGTTTCAAAGACACTAGCTGTAGCACCAGATACCAACAAGGCTAGAGATTCAACAGCTTCAATGTTTGAAATTCTTGATAGTAAACCAACAATTGACTCAAGTAATAATGACGGTACGATACTAGAAACTGTGAAAGGTGATATTGAACTTCAACAAATCAAATTTAGATACCCAACAAGGCCTAATGTTCAAATTTTCCAAGATTTGTGTCTAAGCATCCCAGCCGAAAAGGTAATCAATAACAAATTTAGTAATCTCATAAGACTTCAATTCATATACACTACTGTTGCTTTGGTTGGAGAAAGTGGCTGTGGAAAATCAACAATTATAAGTCTCTTAGAGAGATTTTATAACCCTGATTCTGGACATATATTACTAGATGGAGTGAATATTAAAATGTTTAGACTAAGCTGGTTAAGACAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAATGAAAGCATTCGCGCCAACATAGCTTATGGAAAAAAAGGAAGTACTGCAACAGAAGATGAAATAATTGCAGTAGCAAAAGCAGCAAATGCACACAACTTCATAAGTTCTCTTCCAAATGGTTACGAAACATTGGTCGGCGAAAGTGGCACACATTTATCAGGTGGACAAAAGCAACGTATAGCAATTGCAAGAGCCATATTGAAAGATCCCAAAATACTTTTATTTGATGAAGCAACAAGTGCACTTGATGACGAGTCAGAACTCATAGTTCAAGAGGCTTTAGATAGAGTGAGTGTTAGTAGAACTACTGTTGTTGTGGCTCACCGTCTTGAGACGACTAAAGGTGCTGATATTATAGCTGTAGTGAAAAATGGAGTGATTGCTGAAAATGGTAGACATGATTTGCTGATGAATATTGATGGTGGAGTTTATGCTTCATTGGTTGCTCTTCATATTAGTGCATCATAG 3753 0.3741 MAQTTEEKYDEKVPFYKLFSFADKLDVTLMIIGVICAVANGLSRPLMALIFGKLINTFGSTGPSNIVHEVSKVALLFVYLGIGCGIALFLQVTCWMVTGERQATRIRGLYLKTILKQEISYFDTEATSGEVIGRMSENTILIQDAISEKVGKFIQIISYFLGGYVIAFTKGWELSLVLLACVPCFIIIGGFMSMMMARMSIRGQIAYSEAGAVVEQTVGAIRTVASFTGEEKAIEKYHKKLKIAYYSTVQQGLASGTGMGLLLLIVIGTNALAMWYGSKLIIAKGYNGGHVFNIIISINTGGILMSLGQATPILNAFTTGKVAAYKMFETIKRKPKIDAYDTSGTVLENIKGDIELKDVYFRYPTRPDVHIFSGFSFYIPSGTTAAFVGQSGSGKSTIINLLERFYDPEAGEVLIDDVNLKNFQVRWIREQIGLVCQEPVLFTASIKENIAYGKEGASDEEITTAITLANAKIFIDQLPQGLDTMVGHGTQLSGGQIQRIAIARAILKNPRILLLDEATSALDAESESVVQEALEKVMSQKTTVVVAHRLITIRNADIIAVVHQGKIVEKGIHDELIKDPFGAYSQLISLQEGSEEAKESHNSETDESKNSFNLDSHVTRTSFAKSISQGSSRTNDDVESSELDNVKGQKVSIKRLAKLNKPEVPVLLLGSIAAAVHGVIFPMAALFLSLAVNTFYEPPEKLRKDSEFWSLLSLGLGFITLVAIPVQNYLFGIAGGKLIERIRSLTFNKVVHQEISWFDHPSNSSEAVCARLATDASTVRNLVGDTLALMVQNIATVTAGLVLAFTANWILSFVVLSVSSLLLIHEYIKTKFLKGFSAEAKVKYEEASKVANDAVGSIRTVASFCAEEKMMEMYQKKCSAPEKQGVRLGLISGIGLGFSYFALYCTIAFYFYVGSILVHHGKATFGEVFKVYFCLTVTVVSVSKTLAVAPDTNKARDSTASMFEILDSKPTIDSSNNDGTILETVKGDIELQQIKFRYPTRPNVQIFQDLCLSIPAEKVINNKFSNLIRLQFIYTTVALVGESGCGKSTIISLLERFYNPDSGHILLDGVNIKMFRLSWLRQQMGLVGQEPILFNESIRANIAYGKKGSTATEDEIIAVAKAANAHNFISSLPNGYETLVGESGTHLSGGQKQRIAIARAILKDPKILLFDEATSALDDESELIVQEALDRVSVSRTTVVVAHRLETTKGADIIAVVKNGVIAENGRHDLLMNIDGGVYASLVALHISAS* 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2858 1250 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 668 954 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g2858 1250 Gene3D - 980 1249 IPR027417 -
Tpr7g2858 1250 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 31 319 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g2858 1250 MobiDBLite consensus disorder prediction 594 612 - -
Tpr7g2858 1250 CDD ABC_6TM_Pgp_ABCB1_D1_like 30 327 - -
Tpr7g2858 1250 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 354 589 IPR003439 GO:0005524
Tpr7g2858 1250 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524
Tpr7g2858 1250 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 989 1244 IPR003439 GO:0005524
Tpr7g2858 1250 ProSitePatterns ABC transporters family signature. 492 506 IPR017871 GO:0005524
Tpr7g2858 1250 CDD ABC_6TM_Pgp_ABCB1_D2_like 657 972 - -
Tpr7g2858 1250 CDD ABC_MTABC3_MDL1_MDL2 989 1243 - -
Tpr7g2858 1250 SUPERFAMILY ABC transporter transmembrane region 650 973 IPR036640 GO:0005524|GO:0016021
Tpr7g2858 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 977 1244 IPR027417 -
Tpr7g2858 1250 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 8 1247 IPR039421 -
Tpr7g2858 1250 Gene3D ABC transporter type 1, transmembrane domain 17 957 IPR036640 GO:0005524|GO:0016021
Tpr7g2858 1250 SUPERFAMILY ABC transporter transmembrane region 17 335 IPR036640 GO:0005524|GO:0016021
Tpr7g2858 1250 Pfam ABC transporter transmembrane region 668 936 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g2858 1250 Pfam ABC transporter transmembrane region 30 300 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g2858 1250 SMART AAA_5 1033 1227 IPR003593 -
Tpr7g2858 1250 SMART AAA_5 381 566 IPR003593 -
Tpr7g2858 1250 MobiDBLite consensus disorder prediction 592 612 - -
Tpr7g2858 1250 Gene3D - 344 592 IPR027417 -
Tpr7g2858 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 344 591 IPR027417 -
Tpr7g2858 1250 CDD ABC_MTABC3_MDL1_MDL2 354 591 - -
Tpr7g2858 1250 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 8 1247 - -
Tpr7g2858 1250 Pfam ABC transporter 1035 1175 IPR003439 GO:0005524
Tpr7g2858 1250 Pfam ABC transporter 374 520 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2858 Tpr-Chr7 35906817 35913314 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2858 13 1246 Calmodulin-binding Proteins AT2G36910 42.143 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2858 K05658 - gmx:100792531 1832.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2858 7 35906817 35913314 Tpr7g2858 7 35906817 35913314 ECH