Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2857 ATGGCAGACAACAACACTGACGAGATACATAATTCATCATCTACACAACAACATGAAATCAAAGATAACAAAGCCAATCAAAAAGTACCATTCTACATGTTATTCAATTTTGCTGATAAAATTGATATAACATTCATGATCATTGGCACTATCTCTGCTATGGCTAATGGATTTGCACAACCTCTCATGACACTTTTTATGGGAAAAATCATTAATGCTTTTGGTTCATCTGATCCATCAGATGTTATCAAACAAGTTTCTAAGGTATCATTGCTATTTGTTTACCTGGCTGTTGGGTCTGGAATAGCATCATTTCTACGTAAGACACCCGATACTATTCTACATGTTGCAGAGGTATCATGTTGGATGGTGACAGGAGAAAGACAAGCTGCGAGGATTCGTAGTTTGTACTTGAAAACAATATTAAAACAGGATATTGCATTCTTTGATACTGAAACAAACACAGGAGAGGTAATTGGTAGAATGTCTGGTGACACAATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAATTTTTTCAACTTGCTTCAACTTTTTTTGGCGGCTTTTTGATTGCGTTTATAAAAGGATGGCATCTAGCTATAGTTTTACTCGCATGTATACCTTGTGTTGCTATTGTCGGCAGTTTCATATCCACTATGATGTCTAAAATGTCAAGTCGCGGACAAGTTGCTTATGCAGAAGCAGGAAATGTTGTTGATCAAACAGTTGGAGCCATCAGAACAGTTGCATCTTTTACCGGGGAGAAAAAAGCCATAGAGAAGTATAATAGCAAAATTAAAGTTGCTTATAGTACAATGGTTCAACAAGGGATAATATCAGGGTTAGGAATCGGAACGCTTCTCCTTATTATCTTCTGCACTTATGGACTTGCCATGTGGTATGGTTCCAAACTAGTCATCGAGAAAGAATATAACGGTGGAACGGTCATGACTGTGATCATGTCTCTTATGACTGGTGGAATATCACTAGGTCAGACATCCCCAAGCTTAAATGCATTTGCTGCAGGCCAAGCCGCAGCATATAAAATGTTTGAGACCATTAAAAGAAAGCCGAAAATTGATGCCTATGATACCAGTGGCACTGTCTTGGAAGACATAAAGGGAGATATTGAACTTAAAGATGTTTACTTCAGATATCCTGCAAGGCCAGATGTTCAGATATTTGCTGGATTCTCATTGTTTGTTCCGAGTGGCACAACTACTGCTTTGGTTGGTCAAAGTGGAAGCGGAAAGTCCACTGTGATCAGTCTATTGGAAAGATTCTATGACCCTGAAGCTGGAGAAGTACTTATAGACGGTGTGAATTTGAAGAACTTGCAACTTAGATGGATAAGGGAACAGATTGGGTTGGTTAGTCAAGAACCTATCTTGTTTACTACCACTATCAGAGAGAACATAGCATACGGGAAAGAAGGTGCAACGGATGAGGAGATAACAACAGCAATAACACTTGCTAATGCCAAGAAATTCATTGACAAATTGCCTCAGGGTCTTGACACCATGGCAGGGCAAAATGGGACTCAACTTTCTGGCGGACAAAAGCAAAGAATTGCAATTGCAAGAGCAATATTGAAGAATCCAAGAATCCTTCTTCTCGATGAAGCAACAAGTGCGTTGGATGCTGAGTCTGAACGTATTGTTCAAGAAGCATTAGAAAAAATTATATTGAAAAGGACTACTGTTGTGGTAGCTCATCGTTTGACAACTATCAGAAATGCTGACACAATAGCAGTGGTTCATCAGGGGAAAATCGTGGAGAGAGGAACTCACAACGAGTTAACCATGAATCCTGATGGTGCTTATTCTCAACTTATTCGTCTACAAGAAGGAGAAAAAGAAGATGAAGGTAGCAGTAAGTTCGAAGTAGATGAGTCAGGCGACAATTTAAATATAGATAGTCACATGGCGAGATTCTCCATCCAAAGAACTTCTTTTGCAAGCCGAACTTCGTCAGCAAGTCTTCAACATTCTCTGTCACTTAGAGGCTTATCTGGAAGAATAGAAGAAGATATTGAACAAGGTCAACTTGATAACAAGAAAAAACCCAAAAGGGTATCTATATTGCGTTTGGCCAAGTTGAACAAGCCTGAGGTTCCTGTCATACTGCTTGGAACCATTGCTGCATTAGTACACGGTGTCGTGTTCCCTATATTTGGCTTATTGTTTTCATCAGCCATTGATATGTTTTATAAACCTCCAGAACAGCAGAGGAAAGATTCCAGGTTCTGGTCACTTCTATATGTGGGTTTGGGTTTTGTTACTCTAGTGGTTTTGCCACTGCAGAATTACTTCTTTGGGATTGCTGGTGGAAAACTTATTGAGCGAATTCGTTCATTGACATTTGAAAAGATTGTGCACCAAGAAATTAGATGGTTTGATGATCCTGCAAATTCAAGTGGTGCAGTTGGTGCAAGGTTATCTACCGACGCTTCAACCGTGAAAAGTCTTGTTGGTGATACATTGGCCCTCATTGTGCAGAACATATCAACAGTCACAGCTGGTCTAATTATAGCATTCACTGCTAATTGGATTCTCGCTTTTATAGTTTTGGCTGTGTCGCCTATGGTTCTTATGCAAGGAATGGTTCAGATGAAGTTTCTTAAAGGATTTAGTGCCGATGCCAAGGTGATGTATGAAGAGGCAAGCCAGGTAGCAACCGATGCTGTTAGTAGTATCAGAACTGTTGCATCATTTTGTGCAGAATCAAAAGTTATGGACATGTACAGGAAAAAATGTTTAGGGCCAGAGAAACAAGGCGCTCGTTTGGGGCTTGTTAGCGGTGTAGGCTTTGGTTTCTCTTTTTTTGCTCTATATTGCACAAATGCTTTCACTTTCTACATAGGATCGGTTTTAGTGCACCACGGGAAAGCAACTTTTGCAGAAGTTTTCAGGGTTTTCTTTAGTTTAACAATGACAGCAATCGCCGTTTCCCAGTCTACAACATTGGCTCCAGACACTAACAAGGCCAAAGATTCTGCAGCTTCAATATTTGAAATTCTTGACAGCAAACCTGATATTGATTCCAGCAGTAATGAGGGTGTAACACAAGATACAGTAGTTGGTAATATTGAACTTCAACATGTCAACTTTAATTATCCAACAAGGCCCCACATTCAAATTTTCAAAGATTTAAGCCTAAAAATCCCATCTGGAAAGACAGTTGCCTTGGTTGGAGAAAGTGGCAGTGGAAAATCGACAGTTATAAGTCTCTTAGAGAGATTTTATGACCCTGATTCCGGACGTGTATTACTAGACGAAATGGATATCAAAACTTTCAGATTAAGCTGGTTGAGGCAGCAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGTGCCAACATAGCTTATGGAAAAGAGGGTGAAGCTACGGAGGATGAGATAATTGCAGCAGCTAATGCAGCCAATGCACACAACTTCATAAGTTCTCTTCCAAATGGTTATGATACATCAGTTGGTGAAAGAGGAACACAATTGTCAGGAGGACAAAAGCAACGTATTGCTATTGCAAGAGCCATGCTGAAAAACCCCAAAATACTTTTGCTTGATGAGGCAACAAGTGCACTTGATGCCGAGTCCGAGCGTATAGTTCAAGAGGCTCTAGATAGAGCGAGTCAGAACAGAACTACTGTAGTGGTGGCTCACCGTCTTACAACAATTCGAGGGGCTGATACTATAGCAGTAATTAAAAATGGGGTGGTTGCTGAAAAGGGAACACATGATGTGTTGATGAAGATTACTGATGGTGTTTATGCTTCATTAGTAGCTCTTCATTCAAGTGCATCATAA 3828 0.4002 MADNNTDEIHNSSSTQQHEIKDNKANQKVPFYMLFNFADKIDITFMIIGTISAMANGFAQPLMTLFMGKIINAFGSSDPSDVIKQVSKVSLLFVYLAVGSGIASFLRKTPDTILHVAEVSCWMVTGERQAARIRSLYLKTILKQDIAFFDTETNTGEVIGRMSGDTILIQDAMGEKVGKFFQLASTFFGGFLIAFIKGWHLAIVLLACIPCVAIVGSFISTMMSKMSSRGQVAYAEAGNVVDQTVGAIRTVASFTGEKKAIEKYNSKIKVAYSTMVQQGIISGLGIGTLLLIIFCTYGLAMWYGSKLVIEKEYNGGTVMTVIMSLMTGGISLGQTSPSLNAFAAGQAAAYKMFETIKRKPKIDAYDTSGTVLEDIKGDIELKDVYFRYPARPDVQIFAGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPEAGEVLIDGVNLKNLQLRWIREQIGLVSQEPILFTTTIRENIAYGKEGATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALEKIILKRTTVVVAHRLTTIRNADTIAVVHQGKIVERGTHNELTMNPDGAYSQLIRLQEGEKEDEGSSKFEVDESGDNLNIDSHMARFSIQRTSFASRTSSASLQHSLSLRGLSGRIEEDIEQGQLDNKKKPKRVSILRLAKLNKPEVPVILLGTIAALVHGVVFPIFGLLFSSAIDMFYKPPEQQRKDSRFWSLLYVGLGFVTLVVLPLQNYFFGIAGGKLIERIRSLTFEKIVHQEIRWFDDPANSSGAVGARLSTDASTVKSLVGDTLALIVQNISTVTAGLIIAFTANWILAFIVLAVSPMVLMQGMVQMKFLKGFSADAKVMYEEASQVATDAVSSIRTVASFCAESKVMDMYRKKCLGPEKQGARLGLVSGVGFGFSFFALYCTNAFTFYIGSVLVHHGKATFAEVFRVFFSLTMTAIAVSQSTTLAPDTNKAKDSAASIFEILDSKPDIDSSSNEGVTQDTVVGNIELQHVNFNYPTRPHIQIFKDLSLKIPSGKTVALVGESGSGKSTVISLLERFYDPDSGRVLLDEMDIKTFRLSWLRQQMGLVGQEPILFNESIRANIAYGKEGEATEDEIIAAANAANAHNFISSLPNGYDTSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRASQNRTTVVVAHRLTTIRGADTIAVIKNGVVAEKGTHDVLMKITDGVYASLVALHSSAS* 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2857 1275 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 24 1272 IPR039421 -
Tpr7g2857 1275 Gene3D - 1022 1274 IPR027417 -
Tpr7g2857 1275 Pfam ABC transporter transmembrane region 711 982 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g2857 1275 Pfam ABC transporter transmembrane region 46 328 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g2857 1275 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 24 1272 - -
Tpr7g2857 1275 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 379 615 IPR003439 GO:0005524
Tpr7g2857 1275 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 711 997 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g2857 1275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1023 1269 IPR027417 -
Tpr7g2857 1275 Gene3D ABC transporter type 1, transmembrane domain 113 942 IPR036640 GO:0005524|GO:0016021
Tpr7g2857 1275 CDD ABC_MTABC3_MDL1_MDL2 1032 1268 - -
Tpr7g2857 1275 SUPERFAMILY ABC transporter transmembrane region 34 363 IPR036640 GO:0005524|GO:0016021
Tpr7g2857 1275 CDD ABC_6TM_Pgp_ABCB1_D1_like 46 340 - -
Tpr7g2857 1275 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1032 1269 IPR003439 GO:0005524
Tpr7g2857 1275 Gene3D - 377 630 IPR027417 -
Tpr7g2857 1275 Pfam ABC transporter 1051 1200 IPR003439 GO:0005524
Tpr7g2857 1275 Pfam ABC transporter 400 546 IPR003439 GO:0005524
Tpr7g2857 1275 ProSitePatterns ABC transporters family signature. 518 532 IPR017871 GO:0005524
Tpr7g2857 1275 SUPERFAMILY ABC transporter transmembrane region 689 1014 IPR036640 GO:0005524|GO:0016021
Tpr7g2857 1275 SMART AAA_5 406 592 IPR003593 -
Tpr7g2857 1275 SMART AAA_5 1059 1246 IPR003593 -
Tpr7g2857 1275 CDD ABC_6TM_Pgp_ABCB1_D2_like 700 1015 - -
Tpr7g2857 1275 CDD ABC_MTABC3_MDL1_MDL2 379 617 - -
Tpr7g2857 1275 MobiDBLite consensus disorder prediction 1 21 - -
Tpr7g2857 1275 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 47 344 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g2857 1275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 617 IPR027417 -
Tpr7g2857 1275 ProSitePatterns ABC transporters family signature. 1172 1186 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2857 Tpr-Chr7 35900577 35905803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2857 29 1271 Calmodulin-binding Proteins AT2G36910 44.885 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2857 K05658 - gmx:100801771 1912.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2857 7 35900577 35905803 Tpr7g2857 7 35900577 35905803 ECH