Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2856 ATGGCAAAGTTTAGTTCAAGTTATGGGAATGTTCTTCTTGTTTTTGTTCTTGTTTTATTATCAAATATTTCATTTCAAGTTGCAACATGTGGCTCTATAGTAAAGTTTCTTCCTGGATTCCAAGGACCCCTTCCTTTTCTTCTTGAAACTGGGTATGTGGGAGTGGGAGAAAATGAGGATGTGCAAGTGTTTTACTATTTCATTGAATCAGAGAACAATCCTAAAGATGATCCTCTCATGCTTTGGTTAACTGGTGGACCTGGCTGCTCTGCTTTGTCTGGCCTTGTCTTTGAAATTGGTCCACTTGAATTTATAAAAGAGGAGTACAATGGTAGCCTACCTAATCTCATCTTAAAACCACATTCATGGACAAAGGTGAGTAACATTATATTTGTAGATTTGCCTGTTTTCACAGGCTTCACTTATGCCACAACAGAAACTGGTTCTCAGCGAAGCGATACAATACTAGTTCACCAAGTTCATCAATTTCTCAGAAAGTGGTTGGTTGATCATCCAAAATTTCAATCAAATGAAGTTTACATTGGCGGTGATTCATACTCTGGCATTACTGTTCCGGCAATTGTTCAAGAAATTGCACAAGGAAATAAAAAAGGAGTCCAGCCATGGATAAATCTTCAGGGATACTTGTTGGGGAATCCTGTAACAACTGAACAGGAAATAAACTATGAAATCCCCTTTGCTCATGGAATGGGACTCATATCCGATGAACTATACGAATCACTGCAAAAAAATTGTAACGGAGACTATGCGAATGTAGAGACCAGAAATGTTTTATGTTCCAGAGATATGAGTTCATTCAACGAGGCTACATCAGGACTTAATTCAGCACATATTTTAGATCCAGTATGTGAGTGGCGTGATGATACTGAAATTTCTCCAAGGAGATCTCTAATTAAGAAATATCCCTCCAAGTTCCTCACTAAAAATCTCAAATTGCCGCCCTTATATTGTCGAAGTTATCCATATTTCCTTTGCGGCTTTTGGGCCAACGATGATAATGTTCGCAAAGCACTGCACATACATAAGGGAAGTATCGGGAAATGGCATCGTTGTACCTATAATATACTTAATAAGGCAGATATCCATAACACCTTTGATTATCATGTAAATCTCAGTAGAAAAGGGATTCGTTCACTAATTTACAGCGGAGATCATGACATGTCGGTTCCATTCTTATCAACACAAGCTTGGATAAGATCTTTGAACTACTCCATTGTTGATGATTGGAGACAGTGGCATACAAATGACCAAGTTGCAGGATACACAAGGACTTACTCTAATCGGATGACATTTGCTACTATAAAGGGTGGAGGACACACGGCCCCGGAGTTTCGCCCTAAAGAATGTTTTGACATGTTTAGTAGGTGGATATCTAAGAGGCCTTTGTAG 1410 0.3879 MAKFSSSYGNVLLVFVLVLLSNISFQVATCGSIVKFLPGFQGPLPFLLETGYVGVGENEDVQVFYYFIESENNPKDDPLMLWLTGGPGCSALSGLVFEIGPLEFIKEEYNGSLPNLILKPHSWTKVSNIIFVDLPVFTGFTYATTETGSQRSDTILVHQVHQFLRKWLVDHPKFQSNEVYIGGDSYSGITVPAIVQEIAQGNKKGVQPWINLQGYLLGNPVTTEQEINYEIPFAHGMGLISDELYESLQKNCNGDYANVETRNVLCSRDMSSFNEATSGLNSAHILDPVCEWRDDTEISPRRSLIKKYPSKFLTKNLKLPPLYCRSYPYFLCGFWANDDNVRKALHIHKGSIGKWHRCTYNILNKADIHNTFDYHVNLSRKGIRSLIYSGDHDMSVPFLSTQAWIRSLNYSIVDDWRQWHTNDQVAGYTRTYSNRMTFATIKGGGHTAPEFRPKECFDMFSRWISKRPL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2856 469 Gene3D alpha/beta hydrolase 30 299 IPR029058 -
Tpr7g2856 469 SUPERFAMILY alpha/beta-Hydrolases 34 468 IPR029058 -
Tpr7g2856 469 Gene3D - 331 469 - -
Tpr7g2856 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 468 IPR001563 GO:0004185|GO:0006508
Tpr7g2856 469 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 11 468 - -
Tpr7g2856 469 Pfam Serine carboxypeptidase 38 465 IPR001563 GO:0004185|GO:0006508
Tpr7g2856 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Tpr7g2856 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Tpr7g2856 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Tpr7g2856 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2856 Tpr-Chr7 35885642 35889146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2856 28 57 Calmodulin-binding Proteins AT2G22960 73.333 1.02e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2856 K16296 - gmx:100792006 771.155