Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2850 ATGCCTAAGCAAATCAACGAGATTAAGGATTTCCTTCTCACTGCCAGAAGGAAGGATGCAAGGTCAGTGAGAATCAAGAGGAGCAAGGATGTGGTTAAGTTCAAGGTCAGATGTTCCAAGTACCTTTACACACTCTGTGTGTTTGACGTTGAGAAAGCCGACAAATTGAAGCAATCACTTCCTCCAGGTTTGAGTGTTCAAGACCTGTAG 210 0.4381 MPKQINEIKDFLLTARRKDARSVRIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSLPPGLSVQDL* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2850 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Tpr7g2850 69 Gene3D - 1 69 IPR038464 -
Tpr7g2850 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Tpr7g2850 69 PANTHER - 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2850 Tpr-Chr7 35840279 35842071 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2850 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 92.754 8.64e-43 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2850 K02923 - thj:109116186 135.191