Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2821 ATGAGGCGGAAATGTAACTTGGAACTCTGCCTTTTTCCTACCAATCACCCCATGCTACAAGAAGAAGAAGAAGAAGAAGAAGAGAGTGAACCGAGTCCAATGGAAAATCAGCAACAGGCGTCACTGACCATTTTCTATGATGGCAAGATGTGTGTTACTACTGATGTCACAGAGTTTCAGGCCAAATCCATCTTAATGCTAGCAAATAAAAAGGAACAAGAAAAAGTGAAGACACCAACAGGGTCAGTGCCAACAACACCAACAATTGTAGAATCTCCTCATCAATTGTATAGCCCTGGACCTGGTCTTTCAATGAAGAGATCTTTGCAACGTTTTCTACAGAAAAGAAAGAATCGGATCCAAGAAACATCTCCATATAATCACTAG 387 0.4083 MRRKCNLELCLFPTNHPMLQEEEEEEEESEPSPMENQQQASLTIFYDGKMCVTTDVTEFQAKSILMLANKKEQEKVKTPTGSVPTTPTIVESPHQLYSPGPGLSMKRSLQRFLQKRKNRIQETSPYNH* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2821 128 MobiDBLite consensus disorder prediction 72 104 - -
Tpr7g2821 128 ProSiteProfiles Tify domain profile. 35 70 IPR010399 -
Tpr7g2821 128 MobiDBLite consensus disorder prediction 78 93 - -
Tpr7g2821 128 PANTHER - 1 128 - -
Tpr7g2821 128 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 128 IPR040390 -
Tpr7g2821 128 Pfam tify domain 37 69 IPR010399 -
Tpr7g2821 128 SMART tify_2 33 70 IPR010399 -
Tpr7g2821 128 MobiDBLite consensus disorder prediction 16 40 - -
Tpr7g2821 128 Pfam Jas motif 106 126 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2821 Tpr-Chr7 35519866 35521119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2821 1 127 Tify Gene Family AT1G30135 43.411 5.70e-28 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tpr7g2821 tify 2.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2821 - - gmx:100803886 155.221