Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2784 ATGGAGCACTATCCTCGCTCCACTCAACCTGATCCGTCACCGGAATGGACCGGACCGGATTCTCAAACCGGTCTTGAAGAACCTATGTGGCAATTGGGATTAGGTTCTGCTGCTGGTGAAGATTCGTATCCACTTCGACCTGATGAGATTGATTGTACTTACTATTTGAGAACTGGTTTTTGTGGCTTTGGTTCTAGGTGTCGGTTCAATCATCCTCGTGACCGTGGCGCGGTTATTGGAGCTGCTGCTAGGACTGTAGGGGAGTATCCCGAACGCGCTGGCCAGCCGGTTTGCCAGTATTACATGAGGACAAGATCTTGCAAATTTGGTGCGTCTTGCAAGTACCATCATCCTAGACAGGCTGGAGCAACTGATGCTACTCCTGTTTCACTAAATTATTATGGATATCCGTTACGTCCGGGTGAAAAGGAATGTTCCTATTTTGTGAAAACGGGACAGTGCAAGTTTGGTGCTACTTGTAAATTTGATCATCCAGTTCCTGCTAGTGTCCAAATTCCAGCTCCGTCGCCAATTCCCCCAGTTTCACCTTTACATGTACAAGTACCTTCGCCATTATATCCAACCGTACAGCCTCCACCATCTGGTCCTTCTTCACAACAAATTGGTGTACTGGTCGCAAGGCCACCTCTACTACCTGGTTCGTATGTCCAGAGCCCTTATGGACCTGTGGTATTGTCCCCAACCATGGTTCCATTTTCTGGCTGGGGTCCTTATCAGGCCACTGCAACAAGCCCTGTACTTCCCTCTGGAAATCCGGCTAATGTTGGTTCCACACAGCTTTATGGCATAACCCACATACCTTCATCAGCTAATGCCTATACTGGACCTTATCAACCTTCTGTTTCCTCAGTTGGTCCTTCAAGCAGAAATCAGAAGGAGCAGTCATTTCAAGCAAGGCCTAATCAACCAGAGTATCATTACTACTCTAAACCAGAGGATCTTCCATTTGGTCCATCATATAGTTATCACCAACCACCAGACACAAGTGCACCAAAAGCAAATGTTGTCCTTAGTCCCGCAGGTCTTCCTTTACGCCCGGGAGCAGCACTTTGCACTCATTTCGCACAGCGTGGTATATGCAAGTTTGGTCCTGCATGTAGATTTGATCATCCTATTGCATCACTGAGTTACAGTCCATCTGCTTCTTCCCTTACAGATGCGCCAGTTGCACCCTACTTTGTTGGTTCATCTGTTGGTACTCTTCCTCCTTCATCTTCTTCACCAGAGTTGCAGCCCGAACCTACCGTAGGATCCAGCAGGGAGTCTGTTCCATCCAGAATACCTTCATCAGTGAGCACATCGACTGGATCAGTTGGCTTGACTTTGTCAACTGGTGGCCCTGTTTCTCAATCAAGCACTCGGAGTTCCAGTCCTTTAGCGCCTGCCAATACCGTAACAAGTAACAATGTCTCTCACACCTCAAGCTAA 1449 0.4776 MEHYPRSTQPDPSPEWTGPDSQTGLEEPMWQLGLGSAAGEDSYPLRPDEIDCTYYLRTGFCGFGSRCRFNHPRDRGAVIGAAARTVGEYPERAGQPVCQYYMRTRSCKFGASCKYHHPRQAGATDATPVSLNYYGYPLRPGEKECSYFVKTGQCKFGATCKFDHPVPASVQIPAPSPIPPVSPLHVQVPSPLYPTVQPPPSGPSSQQIGVLVARPPLLPGSYVQSPYGPVVLSPTMVPFSGWGPYQATATSPVLPSGNPANVGSTQLYGITHIPSSANAYTGPYQPSVSSVGPSSRNQKEQSFQARPNQPEYHYYSKPEDLPFGPSYSYHQPPDTSAPKANVVLSPAGLPLRPGAALCTHFAQRGICKFGPACRFDHPIASLSYSPSASSLTDAPVAPYFVGSSVGTLPPSSSSPELQPEPTVGSSRESVPSRIPSSVSTSTGSVGLTLSTGGPVSQSSTRSSSPLAPANTVTSNNVSHTSS* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2784 482 MobiDBLite consensus disorder prediction 284 309 - -
Tpr7g2784 482 ProSiteProfiles Zinc finger C3H1-type profile. 46 74 IPR000571 GO:0046872
Tpr7g2784 482 Gene3D - 121 173 - -
Tpr7g2784 482 ProSiteProfiles Zinc finger C3H1-type profile. 92 120 IPR000571 GO:0046872
Tpr7g2784 482 MobiDBLite consensus disorder prediction 284 311 - -
Tpr7g2784 482 SMART c3hfinal6 46 73 IPR000571 GO:0046872
Tpr7g2784 482 SMART c3hfinal6 139 166 IPR000571 GO:0046872
Tpr7g2784 482 SMART c3hfinal6 352 379 IPR000571 GO:0046872
Tpr7g2784 482 SMART c3hfinal6 92 119 IPR000571 GO:0046872
Tpr7g2784 482 Gene3D - 42 120 - -
Tpr7g2784 482 MobiDBLite consensus disorder prediction 1 24 - -
Tpr7g2784 482 Gene3D - 353 407 - -
Tpr7g2784 482 PANTHER TRANSCRIPTION FACTOR C3H FAMILY-RELATED 1 472 - -
Tpr7g2784 482 SUPERFAMILY CCCH zinc finger 49 74 IPR036855 GO:0046872
Tpr7g2784 482 SUPERFAMILY CCCH zinc finger 95 120 IPR036855 GO:0046872
Tpr7g2784 482 SUPERFAMILY CCCH zinc finger 355 382 IPR036855 GO:0046872
Tpr7g2784 482 PANTHER PROTEIN PHOSPHATASE RELATED 1 472 - -
Tpr7g2784 482 MobiDBLite consensus disorder prediction 410 482 - -
Tpr7g2784 482 ProSiteProfiles Zinc finger C3H1-type profile. 139 167 IPR000571 GO:0046872
Tpr7g2784 482 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 50 73 IPR000571 GO:0046872
Tpr7g2784 482 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 95 119 IPR000571 GO:0046872
Tpr7g2784 482 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 355 378 IPR000571 GO:0046872
Tpr7g2784 482 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 141 165 IPR000571 GO:0046872
Tpr7g2784 482 ProSiteProfiles Zinc finger C3H1-type profile. 352 380 IPR000571 GO:0046872
Tpr7g2784 482 SUPERFAMILY CCCH zinc finger 141 167 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2784 Tpr-Chr7 35085640 35090890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2784 1 448 C2H2 Transcription Factor Family AT5G18550 53.696 3.50e-137 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr7g2784 zf-CCCH 1.5e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2784 - - gmx:100812433 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2784 7 35085640 35090890 Tpr7g2784 7 35085640 35090890 ECH
Tpr4g3438 4 40419591 40424129 Tpr7g2784 7 35085640 35090890 PCT