Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2783 ATGTCAACTTCTAGAACCTCAAACACTTCCCTTAAAGGACATTACCATCCTCATAATCAAACTCAAATAAATCTATCTCTTCTTAAACGAAACACGTCGGTTTGTAGCGAAAAAAGAGGGAGAAGAAAACAAACAGAACCAGGTAAGTTTCTTGGTGTAAGGAGAAGACCTTGGGGTAGATATGCAGCTGAAATTAGAGATCCTAGTACTAAAGAAAGACATTGGCTTGGAACATTTGATACTGCTGAAGAAGCTGCTTTTGCTTATGATAAAGCTGCTCTTTCAATCAAAGGTAGCAATGCTAGAACAAATTTCATCTATTCTACTGAATCTGATGAAACCAATCTTCACAATGTTGTTACTTCTTTAGATGTTCAAAAAACACAACCAACCAATCAAATTGGAGAACAGAATTCTTCTCATTTGAACAATTTGAACAATGAAAATCTGTTTTTCTCTAATGATTATAATAACTCAGGATATCTTGAATGCATTGTTCCTGTTAATTGTTTCAAACCAATTTCCAACACAAACAATTCAAACTTTGATCATAATAGCAATGCAAATGATGTTGATTCCATTAGCACAACAAATTACTTCATGCAGGATCAATCATTTTTTGATCACTACACTCCATTCTCTCAAGAATCAATTAACATTGACACTGAAATTAATGACGGAGTATCATGGGATTGCAATTACAATGAACTTTCAGCTATTTTTAACAAACCACTAAGGAGTAATGAAAGTCCAAGCTATGGACTAATGACAACTCATGATGTTTCTTCAACTACCTATTCTTCGCCATCATATTCTTCTTTCGGCGATGTTGACATGGGATACTCACTCTTCTGA 855 0.3439 MSTSRTSNTSLKGHYHPHNQTQINLSLLKRNTSVCSEKRGRRKQTEPGKFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAFAYDKAALSIKGSNARTNFIYSTESDETNLHNVVTSLDVQKTQPTNQIGEQNSSHLNNLNNENLFFSNDYNNSGYLECIVPVNCFKPISNTNNSNFDHNSNANDVDSISTTNYFMQDQSFFDHYTPFSQESINIDTEINDGVSWDCNYNELSAIFNKPLRSNESPSYGLMTTHDVSSTTYSSPSYSSFGDVDMGYSLF* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2783 284 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Tpr7g2783 284 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Tpr7g2783 284 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 284 - -
Tpr7g2783 284 SUPERFAMILY DNA-binding domain 49 107 IPR016177 GO:0003677
Tpr7g2783 284 MobiDBLite consensus disorder prediction 1 21 - -
Tpr7g2783 284 CDD AP2 49 105 IPR001471 GO:0003700|GO:0006355
Tpr7g2783 284 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Tpr7g2783 284 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Tpr7g2783 284 Pfam AP2 domain 50 98 IPR001471 GO:0003700|GO:0006355
Tpr7g2783 284 Gene3D AP2/ERF domain 49 107 IPR036955 GO:0003700|GO:0006355
Tpr7g2783 284 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2783 Tpr-Chr7 35083368 35084222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2783 1 122 AP2-EREBP Transcription Factor Family AT5G18560 56.934 6.53e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g2783 AP2 1.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2783 - - mtr:MTR_2g019750 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3439 4 40425874 40427125 Tpr7g2783 7 35083368 35084222 PCT