Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2781 ATGTTCTGTCACTCTCGCAGAGCATTGCTCTGCCCTAACCTCACATTCAAAACCCAAAAACCCTCTTCAATCCTTCTTCTTCTCCAACATTTTTCCTCTTCCAATCAACAACAATCTTTCACAGTCAACTACCTCGTTCAAAACCTCGGTTTCTCCCATGAAACAGCTTCAAAACTTTCCAACCAAGTTCATTTCAAAGACTCACAAAAACTAGACACAATCCTAGCATTTTTCAAATCCTATGGCTTCTCAAATAATCACTTATTTCGTATCATCAAAACTCGCCCAGATGTTCTCTCTTACGATCTTAACAAAACCATTCTCCCAAAATTCAATTTTCTTCTCTCAAAGGGTGCTTCAAAATCTGATCTTGTTCACATCATAACCAAAACCCCTGTTATCTTGTGTCAAAGCTTGGAAAATACTATAACCCCATCTTATGATTTTGTCAAAAGATTCTTACTTTCTGATCAATCAACTATTGCATTTCTCAAACATTGTGATCGCATGATTTTTTCTAAAAACCCATTACAGAATATTCAACTTTTGATTCAAAATGGGGTTCCTGAGTCAAAGATGGTTATTTTGCTACGAAATTGGTATCCTATACTTGCTGAAAATCCTCTTTTTTTGAATAGGGCTGTGGTGGAAGTAAAGGAATTGGGATTTAACCCTAAATCGACGGTTTTCATTGTCGCCTTGCGTGCTAAGGTTAATAATAAGTCACTTTGGGGAAGGAAGATTGATGTGTTTAAGAAATGGGGTTGGTCTGAAGAGAATGTTGTTTCAGCATTTGTGAAACATCCTTGGTGTATGTTGTCATCTGTGGAGAAAATTGAGGCAGTGATGAAGTTTTTTGTCAATGAAATGGGTTGGGATTCTCTTGTGCTTGCTAAGTATCCAGTACTTTTTTTGCATAGTTTGGAGAAAAGGGTTATTCCTAGAGCTTTTGTTTTGCAATTTCTTGAGTCGAAAGGTTTGATTAAGGATGCTAAATTGGTTACACCTTACAAACTTTCTGAGAGTTTGTTTGTGAAGAGATATGTGACTTGCTATAAGGATGAAGCTTCTCAGTTGTTGAAGTTGTATGAAGATAAGAAAGATGTTTCAAATAATGTTTTGAAAGAAGGGTTCCAGGAATTACTTGTTGCATTTGACATATCTGCTGCTTTATCAGTTTATCCTGAGTTATTTTGTGAAGAGGCTGTTATGAATAAGGGGGACAAAGAAGTTACTATAGTAACAAATTCACATGACGAGGAGGGACAGGTGGCAATATTCCCTATAGTGAGGAGCCAAGACGTGGAATGA 1311 0.3684 MFCHSRRALLCPNLTFKTQKPSSILLLLQHFSSSNQQQSFTVNYLVQNLGFSHETASKLSNQVHFKDSQKLDTILAFFKSYGFSNNHLFRIIKTRPDVLSYDLNKTILPKFNFLLSKGASKSDLVHIITKTPVILCQSLENTITPSYDFVKRFLLSDQSTIAFLKHCDRMIFSKNPLQNIQLLIQNGVPESKMVILLRNWYPILAENPLFLNRAVVEVKELGFNPKSTVFIVALRAKVNNKSLWGRKIDVFKKWGWSEENVVSAFVKHPWCMLSSVEKIEAVMKFFVNEMGWDSLVLAKYPVLFLHSLEKRVIPRAFVLQFLESKGLIKDAKLVTPYKLSESLFVKRYVTCYKDEASQLLKLYEDKKDVSNNVLKEGFQELLVAFDISAALSVYPELFCEEAVMNKGDKEVTIVTNSHDEEGQVAIFPIVRSQDVE* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2781 436 PANTHER CGI-12 PROTEIN-RELATED 24 371 IPR003690 GO:0003690|GO:0006355
Tpr7g2781 436 SMART mt_12 89 120 IPR003690 GO:0003690|GO:0006355
Tpr7g2781 436 SMART mt_12 294 328 IPR003690 GO:0003690|GO:0006355
Tpr7g2781 436 SMART mt_12 262 293 IPR003690 GO:0003690|GO:0006355
Tpr7g2781 436 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Tpr7g2781 436 Gene3D Transcription termination factor 3, mitochondrial 173 362 IPR038538 -
Tpr7g2781 436 Gene3D Transcription termination factor 3, mitochondrial 36 172 IPR038538 -
Tpr7g2781 436 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 24 371 - -
Tpr7g2781 436 Pfam mTERF 245 334 IPR003690 GO:0003690|GO:0006355
Tpr7g2781 436 Pfam mTERF 75 204 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2781 Tpr-Chr7 35048965 35051719 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr7g2781 mTERF 1.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2781 K15032 - gmx:102663105 390.193