Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2762 ATGGGTTGTGTGTTTGGTAAAGAGTCATCAGTGGAAGAGAGGAGAGAGGAAGTTAGAGAAGCAAAAGTAGATGTGGGTGTGGGTGGTAGTGGTAGAGAGGTTGAGAATGTGAAAGAGGGTGGAGAGGAGAAGAGAATAAGGCCTGGTGGGGAGAGAAGAAGACGATCTTCGAAGCCGAATCCGAGGTTGAGTAATCCATCTAACAATGTTCATGGTGAACAGGTTGCAGCTGGTTGGCCCTCTTGGTTATCTAAGGTTGCTGGTGAAGCTATCAATGGATTGGTTCCTAGGAGAGCTGATACTTTTGAGAAACTTGATAAGATTGGGCAAGGTACATACAGCAATGTTTACAAAGCTAGGGATACTTTAACAGGGAAGATTGTTGCCCTAAAGAAGGTCCGTTTCGACAATTTAGAGCCCGAGAGTGTGAAGTTCATGGCAAGAGAGATTCTGATTCTTCGTCGTTTGGATCATCCCAATGTTGTCAAATTGGAAGGCTTAGTGACTTCAAGAATGTCATGCAGTTTATATCTTGTGTTTGAATACATGGCACATGATCTGGCTGGACTTGCTACAAATCCAGCGATTAAGTTCACAGAACCTCAGGTAAAATGTTACATGCATCAGCTATTTTCTGGGCTGGAACATTGTCACAACCGTCATGTGCTGCATCGTGATATAAAGGGTTCAAACCTTCTTATTGACAATGATGGAATTCTCAAGATTGCTGATTTTGGACTAGCTTCCTTCTTTGATCCTGATCACAAGCACCCGATGACAAGTAGAGTGGTGACATTATGGTATCGACCTCCAGAACTTCTTCTTGGTGCCACTGAATATAGTGTAGGCGTGGACCTATGGAGTGCTGGCTGCATTCTTGCAGAATTATTGGCTGGAAAACCTATCATGCCTGGTCGAACAGAGGTTGAGCAGCTACATAAGATATTTAAGCTATGTGGTTCTCCATCTGAAGAATATTGGAAAAAGTCAAAGCTGCCACATGCTACCATTTTTAAGCCTCAACAATCATACAAGCGATGCATAGCGGAGACTTTTAAGAATTTTCCACCATCATCCTTGCCACTGATTGAAACCCTTCTCACAATTGATCCTGATGAACGTCTGACTGCCACCGCTGCATTGCATAGTGAATTTTTTACTACAAAACCTTATGCTTGTGATCCCTCTAGCCTTCCTAAATATCCTCCCAGTAAAGAGATGGATGCAAAGCTACGGGACGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAGAGCAAATGCTGATGGTGTGAAGAAATCTCGTCCACGTGAGCGAGTAGGGAGGGGACTTCCCATTCCAGATGCCAATGCTGAACTGCAAGCAAATATTGATAGACGACGATTGATCACGCACGCAAATGCTAAGAGCAAGAGTGAGAAGTTTCCTCCTCCACACCAAGATGGAGCTCTAGGCTATCCTTTGGGTTCTTCACAACACATGGATCCAATTTTCGATCCTCCCGACATTCCATTTAGTTCAACAAACTTGTCACAACCAAAATCAAATATCCATACTTGGTCCGGTCCGTTGCTCGATCTCGGTAGCGTTGGTGCACCGAGGAGAAAGAAGAAACATGGAAGGTGA 1623 0.4412 MGCVFGKESSVEERREEVREAKVDVGVGGSGREVENVKEGGEEKRIRPGGERRRRSSKPNPRLSNPSNNVHGEQVAAGWPSWLSKVAGEAINGLVPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMAHDLAGLATNPAIKFTEPQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGILKIADFGLASFFDPDHKHPMTSRVVTLWYRPPELLLGATEYSVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKNFPPSSLPLIETLLTIDPDERLTATAALHSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAAGRANADGVKKSRPRERVGRGLPIPDANAELQANIDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSQHMDPIFDPPDIPFSSTNLSQPKSNIHTWSGPLLDLGSVGAPRRKKKHGR* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2762 540 Gene3D Phosphorylase Kinase; domain 1 90 184 - -
Tpr7g2762 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Tpr7g2762 540 SMART serkin_6 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2762 540 MobiDBLite consensus disorder prediction 1 70 - -
Tpr7g2762 540 MobiDBLite consensus disorder prediction 491 540 - -
Tpr7g2762 540 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Tpr7g2762 540 CDD STKc_CDK9_like 102 386 - -
Tpr7g2762 540 Pfam Protein kinase domain 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2762 540 PANTHER CYCLIN-DEPENDENT KINASE 1 539 - -
Tpr7g2762 540 MobiDBLite consensus disorder prediction 35 58 - -
Tpr7g2762 540 ProSiteProfiles Protein kinase domain profile. 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2762 540 MobiDBLite consensus disorder prediction 503 518 - -
Tpr7g2762 540 Gene3D Transferase(Phosphotransferase) domain 1 185 425 - -
Tpr7g2762 540 PANTHER CELL DIVISION PROTEIN KINASE 1 539 - -
Tpr7g2762 540 MobiDBLite consensus disorder prediction 8 23 - -
Tpr7g2762 540 SUPERFAMILY Protein kinase-like (PK-like) 97 392 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2762 Tpr-Chr7 34843170 34847561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2762 97 424 Core Cell Cycle Gene Families AT5G10270 51.744 6.59e-118 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr7g2762 Pkinase 2.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2762 K08819 - gmx:100779413 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2762 7 34843170 34847561 Tpr7g2762 7 34843170 34847561 ECH
Tpr4g3458 4 40613743 40617094 Tpr7g2762 7 34843170 34847561 PCT