Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2750 ATGGATTCCCAATCTCAATCTCAATCCCAATCAATTCCCCTTCCGATGGAACCTCCCGAAGATCTCTCCTCCGTTTGGGACCTCTCTGACCTTCTCGACTTCAATCTCGACGACGAAATTCCACAACTCCCTCTTCTCCCAAACCCTAACCCTAACCCTAACGAAACTAATACTTATAATAATGATAACAATGATAAGATCCGAAAACGTGACCCGAGATTAACTTGCTCCAACTTTCTCGCGGGTTATGTACCATGTGCATGTCCTGAACTCGATGCTTTGCTTGAAGATAAAGGTTTACCGGGAAAGAAACGCGCTCGGACGGTGCGTGCTTCTACATCGGCGCGGTGTCAAGTTCCTGGTTGTGAAGTTGATATCTCTGAACTTAAAGGCTATCACCGACGACATAGGGTTTGTTTGCGATGTGCTAATGCTGTTACTGTTGTTGTTGATGGTGAAGCCAAAAGATACTGTCAACAGTGTGGAAAGTTTCATGTTTTACCGGATTTCGATGAAGGGAAACGGAGTTGTAGACGAAAATTGGAGCGTCATAATAATAGGAGGAGGAGAAAGCCTGCTGATTCTGTAGCTGGAGTTGATAATGAACTTCAAACTGTTACTCAAAATGATGATTCCAATTGTGATGGAGAAGCAGGAATAGATTATTCGAATTTGAGTAGTGAGAATATTGAAAAAAGAGTGTTGCTGGATCATGAAGAAGAACCGGTTGTTACTGGGTCCTCAACTCCAGAGACTCAGAATGTTAATGGTGATGGTGTTGTCTCCTTTGCTGCTTCTGCTGAAGAACAAGTGAATATTGGAAAAGATGTTTCCAATCTTTCCAAGTCACCTTCATTTTGTGACAATAAGAGTGATTATTCGTCTATGTGCCAAACAGGTCGGGTTTCTTTTAAGCTTTACGATTGGAATCCTGCGGAATTTCCTAGAAGGCTGCGGCTTCAAATATTCCAATGGTTGGCAAGTATGCCTGTGGAGCTGGAGGGATATATCCGCCCTGGATGTACAATCCTTACAATTTTTATTGCAATGCCAAGTGTTATGTGGATAAATTTACTCAAAGATCCTATGTATTATGTGCGTGAACTTGTTGCTCCCAGAAATATGCTATCTGGAAGAGGCACCGCTCTAATTCATCTGAATGACATGATCTTCCGTGTTATGAAAGATGGAAGTTCTGTGATGAAAGCCGAGGTAAACGAGCAGGCACCTAAGCTTCACTATATTCATCCCACATGCTTTGAAGCAGGAAAACCCATGGAGTTTTTTGCTTGTGGAAGTAACTTGCTGCAGCCTAAGTTTCGGCTTCTTGTATCTTTTTATGGGAAGTATCTGAAGTATGAGTATTGCGTTCCGTCTCCACATAACTGGGCTGAAGACAATACTTCTTGTGCTTTTGATAATCAGTTATATAAGATATGTGTCCCTCATATTGAGGAAAATCTCCTGGGGCCTGCATTTATTGAGGTTGATAATGAGTCTGGTTTATCAAACTTCATTCCTGTACTTATTGCGGATAAAGAAGTTTGCACTGAAATGGAGATACTGCAACAAAAACTTGATGCCTCTTTCCGTTCTAAACAATTTCGGTCTGCATCTGGTGGTTCTGTTTGTAGCTCATGTGAAGCTTTTGTACATACTCACACATCATCATCAGACTTGCTTGTAGATATAGCATGGTTACTTAAGGACCCTGCTTCAGAAAATTTTGATAGAATGATATCTGCTTCACAAATTCAAAGATATTGCCATTTGTTGGATTTTCTAATAAGCAATGATTCAACTATCATTTTGGGAAAAATATTGCCAAATTTGATAATTTTAACAGAAAGCATGAAATCCAATATAAATGATGTTGACATGTTCCAACTACTGAAGTGCATGCAAAATGCCAAAGATGTTATTTGTCAGAAAGGTGGAGGTTTAGTTTTGCACTCCAAAACGGATGACTTTAAACCCGGTCAATGCTGTTCCCAAGATGACAAGTTATCAGTTGTTGAAGTTAATAGTCAGGGTATCCAGTTTAGAGTAGATGCAGAGTTGGGAGTTCCGAGAAGTCTCCCGTCTGATGAAAAAAGTCAGAAGATACCGCTTCTGAAAAGGGATATTATAATGAATATGGAAGAGTTTCCCAGAAGATATGACCGTCGAAATCTTACCAGGGGATTCTTGAGCTCTCGGCCAACTATTTTTGTCCTTGTTTCAGTTGTTGTTTGTCTTATGGTATGCGTATCCATATTTCATCATGGGAGGGTTAATGAGTTAGCAGTATCCATTAGAAGGTGTTTGTTTAACCATTAA 2319 0.4028 MDSQSQSQSQSIPLPMEPPEDLSSVWDLSDLLDFNLDDEIPQLPLLPNPNPNPNETNTYNNDNNDKIRKRDPRLTCSNFLAGYVPCACPELDALLEDKGLPGKKRARTVRASTSARCQVPGCEVDISELKGYHRRHRVCLRCANAVTVVVDGEAKRYCQQCGKFHVLPDFDEGKRSCRRKLERHNNRRRRKPADSVAGVDNELQTVTQNDDSNCDGEAGIDYSNLSSENIEKRVLLDHEEEPVVTGSSTPETQNVNGDGVVSFAASAEEQVNIGKDVSNLSKSPSFCDNKSDYSSMCQTGRVSFKLYDWNPAEFPRRLRLQIFQWLASMPVELEGYIRPGCTILTIFIAMPSVMWINLLKDPMYYVRELVAPRNMLSGRGTALIHLNDMIFRVMKDGSSVMKAEVNEQAPKLHYIHPTCFEAGKPMEFFACGSNLLQPKFRLLVSFYGKYLKYEYCVPSPHNWAEDNTSCAFDNQLYKICVPHIEENLLGPAFIEVDNESGLSNFIPVLIADKEVCTEMEILQQKLDASFRSKQFRSASGGSVCSSCEAFVHTHTSSSDLLVDIAWLLKDPASENFDRMISASQIQRYCHLLDFLISNDSTIILGKILPNLIILTESMKSNINDVDMFQLLKCMQNAKDVICQKGGGLVLHSKTDDFKPGQCCSQDDKLSVVEVNSQGIQFRVDAELGVPRSLPSDEKSQKIPLLKRDIIMNMEEFPRRYDRRNLTRGFLSSRPTIFVLVSVVVCLMVCVSIFHHGRVNELAVSIRRCLFNH* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2750 772 Pfam SBP domain 117 191 IPR004333 GO:0003677
Tpr7g2750 772 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 20 770 - -
Tpr7g2750 772 MobiDBLite consensus disorder prediction 44 66 - -
Tpr7g2750 772 ProSiteProfiles Zinc finger SBP-type profile. 114 191 IPR004333 GO:0003677
Tpr7g2750 772 Gene3D - 112 178 IPR036893 GO:0003677|GO:0005634
Tpr7g2750 772 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 20 770 IPR044817 GO:0003677
Tpr7g2750 772 MobiDBLite consensus disorder prediction 1 23 - -
Tpr7g2750 772 SUPERFAMILY SBT domain 115 195 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2750 Tpr-Chr7 34702899 34710085 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2750 17 766 SBP-box Gene Family AT5G18830 45.362 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Tpr7g2750 SBP 1.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2750 - - lja:Lj6g3v1916050.1 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2750 7 34702899 34710085 Tpr7g2750 7 34702899 34710085 ECH