Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2743 ATGAGCGATGTAGCACGAGAACCACCACCATCACAACCTTCTTCCTCAAGCAATGACGTTCAAAAGTTAGAAAGAAAACAAATAGATAGAGTTACTTCAAGAACCAGACGACCACGACCTGGATTTTCTGATTCTTTTTCTACCATTGATTTTGGAAATTTAGAGATAGATGAAGGAAACCAGTCTGATCAGTATTCTCCAAGAAGTCAAGAATCTGATACACCAAGTTCAAGAGCAAGCACTTCTGATTCTGAGGGAGGTCCAAGAGGAAATAATCAGTGGCGTGGTTTCTTTAAACTACTGAAGAAAGGATCGGAAAAGCCTTTTCAAACCTTTCATCCATTGAAAAATGTTCCGAAACTTACTAGAAGAAAAAGCAAAAGAATTAGGGAGGATCTTATCCCTTCTCTCAATTCTCCAGCTCTTCAGTCTTCTTTTGACGCCGAGTTTTGCTGCTTCAAATCTTCATGGAAGAATTTCACTATCGCAGAAATTCAAGCCGCAACCAATAACTTTAGCCATGCTAATTTGCTTGGTGAGGGAGGATATGCTGAGGTTTACTTAGGTAAATTGGAAGATGGAAACTTTGTTGCCATTAAAAAGTTGACAAAAGGTAGCCAAGAAGAAATGACTGCAGATTTTTTGTCTGAGCTTGGCATTATAGTGCATGTGGATCACCCCAATATTGCTAGATTGATTGGATATGGTGTTGAAGGTGGAATGTTTCTTGTTCTTCAATTGTCTCCTCATGGAAGCTTGTCGTCCTTACTTTATGGACCTAGAGAGAAATTGAATTGGAGCCTTAGATATAAGATTGTTTTGGGGACTGCTGAGGGTCTTCGCTATCTGCACGAGGGATGTCAAAGAAGGATTATTCACAAAGATATCAAGGCTTCTAATATTCTGCTCTCGGAGGATTTTGAGCCTCAGATATCTGATTTTGGGCTTGCAAAGTGGTTACCTGATCAATGGACTCACCATACTGTTTCCAAAGTGGAAGGCACATTTGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACTGATGTTTTTGCTTATGGTGTACTATTATTGGAGCTTATTACTGGAAGACAAGCTTTAGATAGTTCACAAAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTATCTAGTAATAACATCAAAGAGCTAGTTGATCCAATTTTGCAAGGTGCTTATGATGAAGAACAGATGAAACTTGTAATCTTAACAGCTTCTATGTGTATAGACCAGGCCTCGATACAGCGACCACATATGAGTGAGGTCTTACAGATACTAAGAGGTGAAGAAGAGGGCAAGAAAATCTTGAAAGAAAGGCAAAACTCAAAACTTCATAGGACATACTCTGAAGAACTATTTGATGCAGAAGATTACAACTCAACAAAGTTATTAAGCGGCGAGAGGGATCGACACATGGAGACAATTTTAGGCTCCAATAATCTAAATTAG 1482 0.392 MSDVAREPPPSQPSSSSNDVQKLERKQIDRVTSRTRRPRPGFSDSFSTIDFGNLEIDEGNQSDQYSPRSQESDTPSSRASTSDSEGGPRGNNQWRGFFKLLKKGSEKPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNSPALQSSFDAEFCCFKSSWKNFTIAEIQAATNNFSHANLLGEGGYAEVYLGKLEDGNFVAIKKLTKGSQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSLLYGPREKLNWSLRYKIVLGTAEGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVFAYGVLLLELITGRQALDSSQKSLVMWAKPLLSSNNIKELVDPILQGAYDEEQMKLVILTASMCIDQASIQRPHMSEVLQILRGEEEGKKILKERQNSKLHRTYSEELFDAEDYNSTKLLSGERDRHMETILGSNNLN* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2743 493 SMART serkin_6 172 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2743 493 Gene3D Transferase(Phosphotransferase) domain 1 249 464 - -
Tpr7g2743 493 MobiDBLite consensus disorder prediction 1 92 - -
Tpr7g2743 493 MobiDBLite consensus disorder prediction 7 21 - -
Tpr7g2743 493 MobiDBLite consensus disorder prediction 22 37 - -
Tpr7g2743 493 ProSitePatterns Protein kinases ATP-binding region signature. 178 201 IPR017441 GO:0005524
Tpr7g2743 493 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 36 475 - -
Tpr7g2743 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Tpr7g2743 493 ProSiteProfiles Protein kinase domain profile. 172 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2743 493 Pfam Protein tyrosine and serine/threonine kinase 176 435 IPR001245 GO:0004672|GO:0006468
Tpr7g2743 493 MobiDBLite consensus disorder prediction 38 89 - -
Tpr7g2743 493 PANTHER OS08G0249100 PROTEIN 36 475 - -
Tpr7g2743 493 Gene3D Phosphorylase Kinase; domain 1 145 246 - -
Tpr7g2743 493 SUPERFAMILY Protein kinase-like (PK-like) 157 453 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2743 Tpr-Chr7 34628483 34632046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2743 143 457 Receptor kinase-like Gene Family AT1G53420 40.000 3.82e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Tpr7g2743 PK_Tyr_Ser-Thr 7.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2743 - - lja:Lj6g3v1915960.1 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2743 7 34628483 34632046 Tpr7g2743 7 34628483 34632046 ECH
Tpr7g2743 7 34628483 34632046 Tpr1g1492 1 13702237 13706028 ECH
Tpr7g2743 7 34628483 34632046 Tpr6g0228 6 1857797 1861543 ECH
Tpr7g2743 7 34628483 34632046 Tpr1g1249 1 11167581 11170809 ECH