Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2738 ATGGCATCACTTGTTGCCAGTGGTAACAGTCAAATGTCTTCCGTCCAAGAAAAAGGAAGTAGGAATAAGAGAAAATTCAGGGCAGATCCACCTTCAGGGGAGCCAAATAAGATTATATCTTCACCTCAACATGAGAGCCTAAGTTATGAATTTGCTGCTGAAAAAATCGAAATAACCCCAACTTTTGGGCGAGTCACAGCTTCTGACTTGTGCAGTGTTAGCCATAGCCATGATTGTTCTGATGGCTTGAAGCTTGACCTTGGATTATCTAGCCCTGTTGTTTCACCTGAGGTTAGGATTAGCCATCCTAAGGAGGAACTAGAGGTGGTTGAATCCCATGGTGCTGATTGGAGTGATCACACAGAAACTCAGTTGGAAGAACTTGTTTTGAGCAATTTGCAAACCATTTTCAAGAGTGCAATAAAAAAAGTTGTTGCTTGTGGCTACACTGAAGATGTTGCTACAAAGGCTATGTTAAGACCTGGCGTCTGTTATGGATGCAAAGACACTGTGTCTAATATAGTTGAGAACACTTTAGCTTTTCTAAGAAACGGCCAAGAGTTTGATCCTTCACGGGAGCACTATTTTGAAAATTTAGTGCAGCTTCAGAAGTATATCTTGGCTGAATTGGTTTGTGTTCTTCGAGAGGTTAGGCCATTTTTCAGTGTTGGGGATGCAATGTGGTGTCTGTTAATTTGTGACATGAATGTGTCACACGCTTGTGCAATGGATGGTGATCCTTTTAGCAGTTTATGCAATGATGGCAATGTTGATGGCTGTTCTTCTGTCCAGACTGAATCACAATCAAAAGTTGAAACAAAAAGTCCCGAGTTGAGTCTTCCAAGTCCTTGTAATACAATTCCATCAGTTTCTCAATCTGAGAAATCCATTGTGGCGGAAAATTCTCAAACTGTCGGTGGACTCTTAGAGAAACAGGGTGCTAATTCTGCTGACAAGTCATCTAATGCTTCTGGAACCTCTCATTCTCCCTTGCTACATGAAAAGTGTGGGAGTGTTAGAAAGGTCCATCCCAGTAGCACCAAGAGGGACTACATTTTTCGTCAGAAGTCAATCCATGTGGAAAAAAATTATCGGACATACGGGTCTAAAGGCTCTTCAAGAGGAGGAAAGCTGAGTGGCTTGAGTGGTTTAATCTTGGATAAAAAACTTAAATCTGTATCAGAATCTACCACCATAAACTTAAAGAGTGCATCCATAAACATAAGCAAGGCGGTGGGAATTAATGTCACTCAAGACAATCTCAACACTGATTTATCATCTAATGATGGACCATCTACCCCTACTTCATTTAGCCTGAATTCTAGCGGTGCTATCTCTCGTGCATCCGATCCTTCATCTTCAGAACATGAAGAAAATCCTATACCTGCAGTCGGTATCCCCCCAGATGCATTACCAGCCACAGATACCGATCTTTCTCTTTCACTGTCTTCAAAAAGTAATTCTACAACACCTATATGCTGTGGTCACAAGGTACCTAATAGTAGCTGTGTGGGAATACCATATGACAAGTCCATGGGACAATGGTTGCCCCAAGATAGAAAGGATGAGCTGATTTTAAAGATGGTTCCAAGGGTTCGGGAGCTGCAAAACGAGCTTCAAGAATGGACAGAGTGGGCAAATCAAAAGGTGATGCAGGCTGCTCGTCGGTTGAGTAAGGACAAGGCTGAGCTTAAGACACTAAAACAAGAGAAAGAAGAAGTTGAGCGTCTTAAAAAGGAGAAACAATGTCTAGAAGAAAACACAATGAAAAAGCTTTTTGAGATGGAAAATGCCTTGGGTAAAGCAGGTGGACAGGTGGAACGAGCTAATACTGCAGTACGGAAGCTCGAGATGGAGAATGCTGCATTGAGGAAAGAGATGGAGGCTGCTAAGTTACGTGCAGCAGAATCCGCAACAAACTTTCAAGAGGCCTCTAAAAGGGAAAAGAAGACCCAAATGAAGTTTCAATCATGGGAGAATCAGAAATCGCAGTTACAGGAAGAGCTAAATACTGAAAAAAGCAAATTGGCACAGATATTGAAGGAATCAAAGCAAGCCGAAATGCAAGCGGAGAAATTTGAGGCTAAACGGCGGCAGGCAGCAAAGAAAACTGAAGAGCTTCTCTTGCTAGCCAGTTCTATAAGAAAAGAAAGAGAACAAATTGAGGAGACAGCCAGAGCCAAGGAGGAGACGATCAAATTAGAAGCAGAGATGGAGCTTCAAAGATACAAAGATGACATCCAGAAAATTGAAAAGGAAATTGCACAAATAAGACAGAAGTCCGACTCTTCAAAAATCGCTGCACTAAAACGAGGAATCGATGGAAGCTATGCCGGTAGCTGCAAGGACATGAAAAATGGTTCTGCTCTCGAAGAACCGCAGACCGCGTCCATTTCAGAACTGGTTCAAAAGTTAAATAACTTCTCGATGAAGGGTGGAGGTGTGAAACGTGAAAGGGAATGCGTGATGTGCCTTTCGGAGGAGATGTCCGTTGTATTCCTTCCATGTGCTCATCAGGTTGTTTGCACAAAGTGCAATGAGCTCCATGAGAAGCAGGGAATGCAAGAATGCCCTTCTTGCAGAAGCCCCATCCAGGAGCGTATTTCTGTGCGTTATGCGCGTACATAA 2628 0.4269 MASLVASGNSQMSSVQEKGSRNKRKFRADPPSGEPNKIISSPQHESLSYEFAAEKIEITPTFGRVTASDLCSVSHSHDCSDGLKLDLGLSSPVVSPEVRISHPKEELEVVESHGADWSDHTETQLEELVLSNLQTIFKSAIKKVVACGYTEDVATKAMLRPGVCYGCKDTVSNIVENTLAFLRNGQEFDPSREHYFENLVQLQKYILAELVCVLREVRPFFSVGDAMWCLLICDMNVSHACAMDGDPFSSLCNDGNVDGCSSVQTESQSKVETKSPELSLPSPCNTIPSVSQSEKSIVAENSQTVGGLLEKQGANSADKSSNASGTSHSPLLHEKCGSVRKVHPSSTKRDYIFRQKSIHVEKNYRTYGSKGSSRGGKLSGLSGLILDKKLKSVSESTTINLKSASINISKAVGINVTQDNLNTDLSSNDGPSTPTSFSLNSSGAISRASDPSSSEHEENPIPAVGIPPDALPATDTDLSLSLSSKSNSTTPICCGHKVPNSSCVGIPYDKSMGQWLPQDRKDELILKMVPRVRELQNELQEWTEWANQKVMQAARRLSKDKAELKTLKQEKEEVERLKKEKQCLEENTMKKLFEMENALGKAGGQVERANTAVRKLEMENAALRKEMEAAKLRAAESATNFQEASKREKKTQMKFQSWENQKSQLQEELNTEKSKLAQILKESKQAEMQAEKFEAKRRQAAKKTEELLLLASSIRKEREQIEETARAKEETIKLEAEMELQRYKDDIQKIEKEIAQIRQKSDSSKIAALKRGIDGSYAGSCKDMKNGSALEEPQTASISELVQKLNNFSMKGGGVKRERECVMCLSEEMSVVFLPCAHQVVCTKCNELHEKQGMQECPSCRSPIQERISVRYART* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2738 875 Coils Coil 711 767 - -
Tpr7g2738 875 MobiDBLite consensus disorder prediction 311 333 - -
Tpr7g2738 875 PANTHER OS05G0141500 PROTEIN 9 874 - -
Tpr7g2738 875 MobiDBLite consensus disorder prediction 426 459 - -
Tpr7g2738 875 Coils Coil 606 640 - -
Tpr7g2738 875 SUPERFAMILY RING/U-box 802 868 - -
Tpr7g2738 875 MobiDBLite consensus disorder prediction 426 450 - -
Tpr7g2738 875 MobiDBLite consensus disorder prediction 1 43 - -
Tpr7g2738 875 Pfam Zinc finger, C3HC4 type (RING finger) 818 866 - -
Tpr7g2738 875 PANTHER OS05G0141500 PROTEIN 9 874 IPR046934 -
Tpr7g2738 875 Coils Coil 648 703 - -
Tpr7g2738 875 MobiDBLite consensus disorder prediction 638 659 - -
Tpr7g2738 875 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 799 871 IPR013083 -
Tpr7g2738 875 Coils Coil 550 587 - -
Tpr7g2738 875 MobiDBLite consensus disorder prediction 311 331 - -
Tpr7g2738 875 MobiDBLite consensus disorder prediction 1 17 - -
Tpr7g2738 875 ProSiteProfiles Zinc finger RING-type profile. 821 861 IPR001841 -
Tpr7g2738 875 Pfam Family of unknown function (DUF6592) 132 243 IPR046527 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2738 Tpr-Chr7 34594144 34598714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2738 821 870 C3H Transcription Factor Family AT1G73950 42.000 7.64e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2738 - - gmx:100777140 1210.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2738 7 34594144 34598714 Tpr7g2738 7 34594144 34598714 ECH