Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2688 ATGATTATTCCAGTGCCAGCAACATCATCCTCTGCCTGCAAACAAGACCTGCCCTTAATAAATTTCCAAAAGGGACTCAACAAAATGGAATCATTATTTCATAATAGAAACAAAGATAAGGTGGTAGTGATTATGGGGGCCACAGGAACTGGAAAGACCAAATTAGCCATAGATTTGGCCAAACATTTTCAACCAGCTGAAATTGTGAATTCAGATAAAATGCAAGTTTATAAAGGTCTTGATATTACAACAAATAAGGTAACTGAACAAGAATGTGATGGGGTCCCACATCATCTTTTAGGTGTATTTGATCCAAATTCAAATTTCAGTGCCAATGATTTTTGTTATCATGCTTGTTCAGCTATTGATTCTATTGTGGAAAAAGATGGATTGCCAATTATTGCTGGTGGTTCAAATTCATATTTAGATGCTTTAGTGAATCATTGTAGTGAGTTTAGGTTAAGGTATGAGTGTTGTTTTCTTTGGGTTGATGTTTCACTTCCTGTTCTTCATTCATCGCTTCAATCGCGTGTTGATCGTATGATTGAAGCTGGTCAGTTAGATGAAGTTCGTGAATTTTTTGACCCGTTTGGGGATTATACAAAAGGGATTCGAAGAGCTATTGGGGTGCCTGAATTTCATGATTTTCTAATAGCGGAAGCAAATTCAGCGGACGAGAGAACTAAGAAGAGACTTTTGGAAGATGCCATTGATAGGCTTAAGATTAATAATTGCACACTTGCAAATCGACAGGTTCAAAAGATTCGTCGATTAAATGGAATGTGGAAAAGGAGCATGCATCGTCTTGATGCCACTGAAACGCACCTTAGGCGTGGTTCATATGCTAGTAAGGAGTCATGGGAGGATAACGTGCTTGCAAAAAGTCTTGTGATCCTCTACAATTTTCTTTACGGGGAAACACGAGTTCGCTCTAGAAGTGTTTCACCAAAAGATGTACTTGCCGCCTTTTCTAGTTCATCGCAGACACTGACATTGCCTGCTATTGCGGCGGCGACTCATTAG 1023 0.391 MIIPVPATSSSACKQDLPLINFQKGLNKMESLFHNRNKDKVVVIMGATGTGKTKLAIDLAKHFQPAEIVNSDKMQVYKGLDITTNKVTEQECDGVPHHLLGVFDPNSNFSANDFCYHACSAIDSIVEKDGLPIIAGGSNSYLDALVNHCSEFRLRYECCFLWVDVSLPVLHSSLQSRVDRMIEAGQLDEVREFFDPFGDYTKGIRRAIGVPEFHDFLIAEANSADERTKKRLLEDAIDRLKINNCTLANRQVQKIRRLNGMWKRSMHRLDATETHLRRGSYASKESWEDNVLAKSLVILYNFLYGETRVRSRSVSPKDVLAAFSSSSQTLTLPAIAAATH* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2688 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 198 IPR027417 -
Tpr7g2688 340 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 167 266 - -
Tpr7g2688 340 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 308 IPR039657 -
Tpr7g2688 340 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 31 308 - -
Tpr7g2688 340 Gene3D - 38 303 IPR027417 -
Tpr7g2688 340 Pfam IPP transferase 75 150 - -
Tpr7g2688 340 Pfam IPP transferase 155 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2688 Tpr-Chr7 34101504 34103990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2688 155 319 C2H2 Transcription Factor Family AT2G27760 32.984 4.90e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2688 K10760 - gmx:100812928 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2688 7 34101504 34103990 Tpr7g2688 7 34101504 34103990 ECH
Tpr4g3530 4 41188789 41191059 Tpr7g2688 7 34101504 34103990 PCT