Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2682 ATGCTCTATAATTGTATGCATCAAAATGGTGAACTAATATATATTATTGCAGTTCATAACAATATGGATCAAAAGAAGCAAGAGAATGATATTCCAACACAAACTCATAACGAAAACCAAAATAAATCAAACCAAATAGCGCAACTATCTCGTCCTCTAATTCATACCGCAGGTACTTCCGCCTTTTCATCCTACCTGAGTAGAGAGCATTTCCAACAACGAAAACAACAAGCATTGCAGAGAAAACTCGACACATTTTGGGAAAATCAAAACCATGAAATCGAGGAGACAGTCGATTTCAAAGCTAATTGTTTGCCTTTGGCAAGGATTAGGAAGATAATGAAAACGGACGAGAAAGTAAGTATGATATCATCTGAGACACCTGTTCTATTTGCTAAGGCGTGCGAAATGTTTATTACGGAGTTGACAATGCAGTCATGGGCTATCGTAGAGGAGAACAAAAGAAAAACACTTCAAAAGAGTGATATTTCATCTGCAATATCAAGGAATGATATGTTTGATTTTCTAGTTGATATTGTTCCAAGGGAAAACACATTGGAGCATAACATATTTATGAACATACCAAGAAGAAAAAGTCCTCCATTTGCAAATGTTCCTTATTATTATGTTCCTGTTCCTGTGCCTATGACATCTCAGGATGCTGCAGGTCCATCATATGGTCCTCCAAGAATGCTTATGGGAAGATCTCTTATTGATCAACCTCAATACAAGAGACAACTAAACCATCCTCTTGCAACTCAACTGTTGCCAATCTCAAAACAAGAAGATGATCATTCTTCTGATTTGCCGGATTCAGATGATTGA 825 0.3685 MLYNCMHQNGELIYIIAVHNNMDQKKQENDIPTQTHNENQNKSNQIAQLSRPLIHTAGTSAFSSYLSREHFQQRKQQALQRKLDTFWENQNHEIEETVDFKANCLPLARIRKIMKTDEKVSMISSETPVLFAKACEMFITELTMQSWAIVEENKRKTLQKSDISSAISRNDMFDFLVDIVPRENTLEHNIFMNIPRRKSPPFANVPYYYVPVPVPMTSQDAAGPSYGPPRMLMGRSLIDQPQYKRQLNHPLATQLLPISKQEDDHSSDLPDSDD* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2682 274 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 57 267 - -
Tpr7g2682 274 Gene3D Histone, subunit A 66 182 IPR009072 GO:0046982
Tpr7g2682 274 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 57 267 - -
Tpr7g2682 274 SUPERFAMILY Histone-fold 52 176 IPR009072 GO:0046982
Tpr7g2682 274 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 105 167 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2682 Tpr-Chr7 34038247 34039262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2682 86 234 CCAAT-HAP5 Transcription Factor Family AT1G08970 56.291 2.78e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Tpr7g2682 CBFD_NFYB_HMF 8.6e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2682 K08066 - aprc:113855583 184.496