Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2680 ATGTCTCATATAGCTGTTGAGAGGAATAGGAGAAGACAAATGAATGAACATCTCAAAGTTTTAAGGTCTTTGACCCCTTGTTTCTATATTAAAAGGGGAGACCAAGCATCAATAATAGGAGGAGTTATAGAATTCATCAATGAATTGCATCAAGTTCTTCAAGCTTTGGAGTCTCAAAAGAGAAGGAAGAGTTTAAGCCCTAGCCCTGGTCCAAGTCCAAAAACATTGCAACCGACGTTTCATCAATTCGATATATCCTCCGGAGGAATTGGGACTACTAATGATTTCAAGGAACTAGGAGCAAGTTGTAATTCTTCGGTTGCAGATGTTGAAGTTAAAATTTCAGGTCCAAACGTGATTTTGAGAGTAATTTCTCACCGAATTCTAGGTCAAGTTTCAAGGATCATAACTGTTTTAGAAACTCTTTCTTTTGAAGTTCTTCATCTTAACATCAGTAGCATGGAAGAGACAGTTCTATACCAATTTGTAGTCAAGATAGAGCTGGGATGTCAACTAAGTTTGGAGGAACTTGCAATGGAAGTACAACAAAGCTTTTGTTCAGAGGCACCTATGAAGTTGACTGCTGTTTGA 591 0.379 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFINELHQVLQALESQKRRKSLSPSPGPSPKTLQPTFHQFDISSGGIGTTNDFKELGASCNSSVADVEVKISGPNVILRVISHRILGQVSRIITVLETLSFEVLHLNISSMEETVLYQFVVKIELGCQLSLEELAMEVQQSFCSEAPMKLTAV* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2680 196 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Tpr7g2680 196 PANTHER TRANSCRIPTION FACTOR MUTE 1 189 - -
Tpr7g2680 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 68 IPR036638 GO:0046983
Tpr7g2680 196 SMART finulus 4 55 IPR011598 GO:0046983
Tpr7g2680 196 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Tpr7g2680 196 PANTHER TRANSCRIPTION FACTOR FAMA 1 189 IPR044283 GO:0003700|GO:0010052
Tpr7g2680 196 Gene3D - 1 64 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2680 Tpr-Chr7 34021081 34023736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2680 1 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 65.829 9.25e-85 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g2680 HLH 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2680 - - mtr:MTR_2g022280 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2680 7 34021081 34023736 Tpr7g2680 7 34021081 34023736 ECH