LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g2679	ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAAATTATTGCTGAAAAGAAAATGGAAAGCAAAGATTTCATAGGGGCTCGTACAATTGCCCTTAAGGCTCAGAAACTATATCCTGATCTGGAGAATATCGCTCAATTGCTTGTTGTTTGTGATGTGCATTGCGCTGCTGAGCAGAAACCACTGAGTAATGCTAAGGTGGTGGACTGGTATAAAGTTCTACAAGTTGATCGCAATGATAATGATGTAATAATTAAGAAGCAATATAGGAAGTTTGCTCTCCAGCTTCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAGGCTCAAAGAGTTCTTTTGGATAGAGAAAAACGATCATCACTTAACATGAGCTTGAGCAGTTTTTCAATGAACAGAACTGCCATGCCATCTCATCATCAACGGAATGTTCCGGTGAATTTTAATACTGTGTTGCAAACTAATGTCAGGCCCGTTTTCCCGAACTTAAATCCTCAGCAGCAACAACAGTCTAGGCAGCCAACTCAGCAGGGAGTTAATGGTGGTGTCCAGTCCCCTACATTTTGGACTATGTGCTCATTTTGTTCGGTTAAGTTTGAGTATTACAGGGCAGTTTTAAATAGATCTCTTCGCTGTCAACAGTGCAATAAGCCCTTCATTGCATATGAGATGGATCCACAAAGTACAAAACCGGCAACCAATTCAAGTCAGAACCAGCAACCAGTTCAGCCGAACGATACACCGAATCATGGTGCTTTTAAGTTTGGTGTTGGATCTCAAAGTAATGTCTTTGCTAAGCGGCCCAGAAAAGAATCTCATCATAAGAAAGGCTCTACTTCAAATGTCTCCGTGAAGCCAAATGGAAAGAGAAAGAGAAAGAATGTAGTAGAATCCAGTGAAAGTTCTATAGGCAGCACTGATTCTGAAGATGATACACTTTCTAATGACAAGGGTTTTCCGGGTGTTCCTACTTCTAGAGACGAGCGTCCACGTAGATCGACACGGCAAAAACACCAGGTTTCCTACAAGGAGAATAATGGAAGTGACGATGATGCTGAGTTAAAGCAACCTTTAAAACAGGGTAAGGAGAGTGGTTCACCATATAGTGATGGTGAAAATAATGAGGAAACTGAAATGAATGATCAGAATGGTTTGGCTGCTGGTCTTAAAGATGGTAAGAAAGAGGCGAAAAAGAAGCAAAAAATTTATTCTGAAGAGAGCTCAGGAAATATAGATGTGAAAATTAAGGAGGTGGGAGGAAAAGAAACAGTGGGAAGCTCAAAGATTGATGAAGCTTCAGAGCAATCAGACTCCAAATCATCAGATCATTCAGATGGTTTTGTAGATGGTTTTGTTTATCCTGATCCAGAGTTCAGTGACTTTGATAAGGACAAAAAAGAGGAATGTTTCGCTTCCGGGCAGATTTGGGCTGTTTATGATGATATAGATGCCATGCCTAGATTCTATGCTATAATCAAAAAAGTTTTTTCTGCTGGATTTAAGTTGCAGATAACTTGGCTTGAGGCAGATCCAAATGACAAAGATGAATGCAAATGGATTGAGGAGAAACTGCCAAATGCGTGTGGGAAGTATAAACTTGGTAAGACTGTAACCATTAAAGATCAACCGATGTTCTCTCATCTGACTTTATGTGAAAAGATTGACCGCACTACTTTCAAAGTGTATCCTAGGAAAGGAGAAACTTGGGCTCTTTTTAAGAACTGGGATATTAAGTGGTATATGGATGCAAAATCTCATCAGAAGTATGATTTTGAATTTGTTGAGATCTTGTCGGATTATGTTGAAGGTGCGGGAGTAATTGTTGCATACTTGGCTAAGTTGAAAGGTTTTGTGAGCCTCTACTCTCGAATTACGGAGGGACGTAATTGCTCGTTTCAGATTCCACCAGCTGAGTTGTTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACTGGTAAGGAAAGAGCAGACATTCCTGTAGGATCTTATGAACTTGATCCTATATCCTTGCCGATGGAAGAGTTTGCTGCTACTGATGACGTGGAAGTAAAGGTTGGATCTACTGCCAAGGTTAATTCGGACAGAAGCAATTTGGTAGAGAAGAAGAAGGATCCCGTTAATCATATTGATGATGTTAGTGCTCCATCAGCTTCGGTCGCAGATTCTTTTGAAGTTCCAGACCCTTCGTTCTACCAATTTGATGATGAGAGGTCCCATGAAAAGTTTATGGCTGGCCAGATTTGGGCATTTTATGGCGATGAGGATGAACTTCCGAAATATTACGGTCAGATTAAAGAGGTTAGGAGGATTGACTCAACAATTGAGTTGCAAGTAATTTATCTTACTGACTGCTGGCTACCTAAGAAAGTTGATAAATGGGATGATGAGGATATGATCATTTCCTGTGCAAGATTTAAAGTCAAGCCAAATGGTAAGGTCTGTACTTACCATAACACCAATTCTGTTTCACATCAGGTGCATGCAAGTCTCGATGGAAAGAACAAGTACTGTGAAATTTATCCTCGGAAGGGTGAAATTTGGGCATTGTATAGGGGATGGACGACTAAACTCAAACGTTCTGATTTGAAAAACTGTGAGTATGACATAGTGGAAGTTACTGAAGTCACTGATTCGTGGATAGATGTTTTATTTCTGGAGAAGGTAAGTGGTTACAGTTCAGTTTTTAAGTGCAAATTAAGCAGCGGACGACAGAAGATGTCCATGACGATCGATAGGACCGAGCTGCTCAGGTTCTCCCACCAAATACCTGCTTTCAAACTGACAGAAGAACATGACAGCAATCTGAAAGGCTTCTGGGAACTTGATCCGGGTGCAATACCAGTTCATTATCTTAGAAAGGAATAA	2889	0.406	MDCNKEEALRAKIIAEKKMESKDFIGARTIALKAQKLYPDLENIAQLLVVCDVHCAAEQKPLSNAKVVDWYKVLQVDRNDNDVIIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRSSLNMSLSSFSMNRTAMPSHHQRNVPVNFNTVLQTNVRPVFPNLNPQQQQQSRQPTQQGVNGGVQSPTFWTMCSFCSVKFEYYRAVLNRSLRCQQCNKPFIAYEMDPQSTKPATNSSQNQQPVQPNDTPNHGAFKFGVGSQSNVFAKRPRKESHHKKGSTSNVSVKPNGKRKRKNVVESSESSIGSTDSEDDTLSNDKGFPGVPTSRDERPRRSTRQKHQVSYKENNGSDDDAELKQPLKQGKESGSPYSDGENNEETEMNDQNGLAAGLKDGKKEAKKKQKIYSEESSGNIDVKIKEVGGKETVGSSKIDEASEQSDSKSSDHSDGFVDGFVYPDPEFSDFDKDKKEECFASGQIWAVYDDIDAMPRFYAIIKKVFSAGFKLQITWLEADPNDKDECKWIEEKLPNACGKYKLGKTVTIKDQPMFSHLTLCEKIDRTTFKVYPRKGETWALFKNWDIKWYMDAKSHQKYDFEFVEILSDYVEGAGVIVAYLAKLKGFVSLYSRITEGRNCSFQIPPAELFRFSHRVPSFKMTGKERADIPVGSYELDPISLPMEEFAATDDVEVKVGSTAKVNSDRSNLVEKKKDPVNHIDDVSAPSASVADSFEVPDPSFYQFDDERSHEKFMAGQIWAFYGDEDELPKYYGQIKEVRRIDSTIELQVIYLTDCWLPKKVDKWDDEDMIISCARFKVKPNGKVCTYHNTNSVSHQVHASLDGKNKYCEIYPRKGEIWALYRGWTTKLKRSDLKNCEYDIVEVTEVTDSWIDVLFLEKVSGYSSVFKCKLSSGRQKMSMTIDRTELLRFSHQIPAFKLTEEHDSNLKGFWELDPGAIPVHYLRKE*	963

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g2679	962	Pfam	DnaJ domain	69	128	IPR001623	-
	Tpr7g2679	962	ProSiteProfiles	dnaJ domain profile.	69	133	IPR001623	-
	Tpr7g2679	962	MobiDBLite	consensus disorder prediction	270	402	-	-
	Tpr7g2679	962	Pfam	Domain of unknown function (DUF3444)	458	662	IPR024593	-
	Tpr7g2679	962	Pfam	Domain of unknown function (DUF3444)	730	938	IPR024593	-
	Tpr7g2679	962	PANTHER	-	1	960	-	-
	Tpr7g2679	962	MobiDBLite	consensus disorder prediction	429	453	-	-
	Tpr7g2679	962	MobiDBLite	consensus disorder prediction	369	388	-	-
	Tpr7g2679	962	PRINTS	DnaJ domain signature	71	89	IPR001623	-
	Tpr7g2679	962	PRINTS	DnaJ domain signature	89	104	IPR001623	-
	Tpr7g2679	962	PRINTS	DnaJ domain signature	105	125	IPR001623	-
	Tpr7g2679	962	MobiDBLite	consensus disorder prediction	329	365	-	-
	Tpr7g2679	962	CDD	DnaJ	69	122	IPR001623	-
	Tpr7g2679	962	SUPERFAMILY	Chaperone J-domain	65	136	IPR036869	-
	Tpr7g2679	962	SMART	dnaj_3	68	125	IPR001623	-
	Tpr7g2679	962	MobiDBLite	consensus disorder prediction	429	451	-	-
	Tpr7g2679	962	Gene3D	DnaJ domain	67	184	IPR036869	-
	Tpr7g2679	962	PANTHER	DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN	1	960	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g2679	Tpr-Chr7	34012342	34016845	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g2679	4	234	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT2G01710	33.755	5.81e-25	105

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g2679	-		-	cam:101500991	1362.05